Search results for cg12172478
| Author | PMID | Outcome | Exposure | Tissue | Analysis | N | CpG | Location | Gene | Beta | P |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mulder RH | 33450751 | DNA methylation | age | Whole blood | Model 1 with age as a fixed effect | 2338 | cg12172478 | chr3:16357591 | RFTN1 | -0.0057 | 0E+00 |
| Mulder RH | 33450751 | DNA methylation | age | Whole blood | Model 2 at 6y with age as a fixed effect | 2338 | cg12172478 | chr3:16357591 | RFTN1 | 0.014 | 0E+00 |
| Battram T | 30602389 | DNA methylation | Tissue | Buccal cells and peripheral blood mononuclear cells | EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells | 215 | cg12172478 | chr3:16357591 | RFTN1 | -0.43471 | 2.3E-133 |
| Josephine Robertson | 41361833 | DNA methylation | P02748 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.15 | 2.7E-76 |
| Josephine Robertson | 41361833 | DNA methylation | P02750 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.13 | 1.6E-53 |
| Josephine Robertson | 41361833 | DNA methylation | P18428 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.091 | 2.4E-28 |
| Josephine Robertson | 41361833 | DNA methylation | P01742 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.076 | 3.2E-20 |
| Yao C | 33752734 | DNA methylation | Gene expression of Affymetrix ID: 2612625 (gene symbol: OXNAD1) | Whole blood | Meta-analysis | 4170 | cg12172478 | chr3:16357591 | RFTN1 | NA | 1.3E-18 |
| Josephine Robertson | 41361833 | DNA methylation | P27169 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0681572 | 1.4E-16 |
| Josephine Robertson | 41361833 | DNA methylation | P02671 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.066 | 8.2E-16 |
| Josephine Robertson | 41361833 | DNA methylation | P01042 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0638768 | 9.6E-15 |
| Josephine Robertson | 41361833 | DNA methylation | P02790 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.063 | 1.6E-14 |
| Josephine Robertson | 41361833 | DNA methylation | P01031 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.058 | 2.7E-12 |
| Josephine Robertson | 41361833 | DNA methylation | P29622 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0569423 | 5.1E-12 |
| Josephine Robertson | 41361833 | DNA methylation | P04114 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.05639 | 8.2E-12 |
| Hannah M. Smith | 39706196 | DNA methylation | Total cholesterol | Whole blood | discovery | 18270 | cg12172478 | chr3:16357591 | RFTN1 | -0.221601 | 6.3E-11 |
| Josephine Robertson | 41361833 | DNA methylation | O75636 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0537993 | 7E-11 |
| Josephine Robertson | 41361833 | DNA methylation | P55056 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0532092 | 1.1E-10 |
| Josephine Robertson | 41361833 | DNA methylation | O75882 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0515894 | 4E-10 |
| Josephine Robertson | 41361833 | DNA methylation | P08185 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0511822 | 5.5E-10 |
| Josephine Robertson | 41361833 | DNA methylation | P01042 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.077388 | 7.7E-10 |
| Josephine Robertson | 41361833 | DNA methylation | P02748 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.072 | 8.4E-10 |
| Josephine Robertson | 41361833 | DNA methylation | P04275 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.05 | 1.2E-09 |
| Josephine Robertson | 41361833 | DNA methylation | P00747 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0746851 | 2.6E-09 |
| Josephine Robertson | 41361833 | DNA methylation | P02748 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.069 | 3.2E-09 |
| Hannah M. Smith | 39706196 | DNA methylation | Total cholesterol | Whole blood | sensitivity | 18270 | cg12172478 | chr3:16357591 | RFTN1 | -0.209409 | 4.8E-09 |
| Josephine Robertson | 41361833 | DNA methylation | P02751 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0482957 | 4.8E-09 |
| Josephine Robertson | 41361833 | DNA methylation | P06396 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0472544 | 1E-08 |
| Hannah M. Smith | 39706196 | DNA methylation | HDL cholesterol | Whole blood | sensitivity | 18225 | cg12172478 | chr3:16357591 | RFTN1 | -0.20245 | 1.4E-08 |
| Josephine Robertson | 41361833 | DNA methylation | P02647 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0463455 | 2E-08 |
| Imgenberg-Kreuz J | 26857698 | DNA methylation | Primary Sjogrens syndrome | Whole blood | Whole blood | 500 | cg12172478 | chr3:16357591 | RFTN1 | NA | 2.3E-08 |
| Kyung WK | 32795589 | DNA methylation | atopy | nasal polyp | discovery | 108 | cg12172478 | chr3:16357591 | RFTN1 | 0.03 | 3.1E-08 |
| Josephine Robertson | 41361833 | DNA methylation | P00734 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.045407 | 3.7E-08 |
| Josephine Robertson | 41361833 | DNA methylation | P43652 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0448346 | 5.5E-08 |
| Josephine Robertson | 41361833 | DNA methylation | P55056 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0615629 | 2.1E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P55056 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0651414 | 2.4E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P55056 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0603205 | 3.9E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P02763 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.041 | 6E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P05543 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.041 | 6.2E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P00450 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.041 | 9E-07 |
| Josephine Robertson | 41361833 | DNA methylation | P02750 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.057 | 1.2E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P02748 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.06 | 1.2E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P02649 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0394347 | 1.8E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P04003 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0392793 | 1.9E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P02750 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.055 | 2.2E-06 |
| Mulder RH | 33450751 | DNA methylation | age | Whole blood | Model 1 with age as a random effect | 2338 | cg12172478 | chr3:16357591 | RFTN1 | 0.0015 | 2.8E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P27169 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0580084 | 3.4E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P01042 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0539931 | 5.3E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P01042 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.053267 | 7E-06 |
| Josephine Robertson | 41361833 | DNA methylation | A0A0C4DH38 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.056 | 9.9E-06 |
| Josephine Robertson | 41361833 | DNA methylation | P10643 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.036 | 1.1E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P06727 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0358719 | 1.4E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P08185 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0529235 | 1.5E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P04217 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.036 | 1.5E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01344 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0355721 | 1.6E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01834 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.053 | 1.7E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01019 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0538907 | 1.7E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P02747 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.035 | 1.9E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01023 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.051 | 2.4E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P00740 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.035 | 2.6E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P27169 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0496883 | 2.8E-05 |
| Bohlin J | 27717397 | DNA methylation | Gestational age | Cord blood | Last menstrual period-estimated gestational age | 1068 | cg12172478 | chr3:16357591 | RFTN1 | 0.00059 | 3.1E-05 |
| Josephine Robertson | 41361833 | DNA methylation | A0A0C4DH38 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.049 | 3.1E-05 |
| Josephine Robertson | 41361833 | DNA methylation | A0A0C4DH38 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.049 | 3.2E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P35858 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0342789 | 3.3E-05 |
| Gadd DA | 35945220 | SCP2D1 protein levels (SeqId = 14175-78) | DNA methylation | Whole blood | SomaScan protein measurement | 774 | cg12172478 | chr3:16357591 | RFTN1 | 0.73 | 4.2E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P02751 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0479158 | 4.4E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P27169 | whole blood | OSCA model 3 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0481627 | 4.5E-05 |
| Josephine Robertson | 41361833 | DNA methylation | A0A075B6I1 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.034 | 4.5E-05 |
| Hannah M. Smith | 39706196 | DNA methylation | HDL cholesterol | Whole blood | discovery | 18225 | cg12172478 | chr3:16357591 | RFTN1 | -0.138509 | 4.7E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P02751 | whole blood | OSCA model 2 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0481616 | 4.9E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01619 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.051 | 5.2E-05 |
| Josephine Robertson | 41361833 | DNA methylation | A0A087WSY6 | whole blood | OSCA model 4 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | 0.051 | 5.3E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P01008 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.0333277 | 5.4E-05 |
| Josephine Robertson | 41361833 | DNA methylation | P05160 | whole blood | OSCA model 1 | 14671 | cg12172478 | chr3:16357591 | RFTN1 | -0.03261 | 7.8E-05 |
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*this tab-deliminated tsv file contains the full set of associations and variables, i.e. those in the downloadable catalog.
