Search results for VPS28

 

Author PMID Outcome Exposure Tissue Analysis N CpG Location Gene Beta P
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg04943741 chr8:145651369 VPS28 0.0017 0E+00
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 6y with age as a fixed effect 2338 cg04943741 chr8:145651369 VPS28 -0.0095 0E+00
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg10709532 chr8:145654026 VPS28 -7.1e-05 0E+00
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg08387270 chr8:145649036 VPS28 0.24 5.2E-113
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg11402303 chr8:145651541 VPS28 0.16 4.1E-95
Josephine Robertson 41361833 DNA methylation P02748 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.157669 2.7E-82
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg01467592 chr8:145649356 VPS28 0.11 4.4E-77
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg22645030 chr8:145649678 VPS28 0.067 9.5E-60
Josephine Robertson 41361833 DNA methylation P02750 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.133068 6.1E-59
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg04943741 chr8:145651369 VPS28 0.12 6.3E-55
Bonder MJ 25282492 DNA methylation Fetal vs adult liver Liver - 195 cg27657489 chr8:145651799 VPS28 -1.68399 4.8E-45
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg27034450 chr8:145649435 VPS28 0.043 1.7E-41
Josephine Robertson 41361833 DNA methylation P18428 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.109026 4.9E-40
Yao C 33752734 DNA methylation Gene expression of Affymetrix ID: 3158609 (gene symbol: VPS28) Whole blood Meta-analysis 4170 cg22918572 chr8:145654090 VPS28 NA 3.5E-34
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg04043426 chr8:145649531 VPS28 0.025 9.8E-34
Josephine Robertson 41361833 DNA methylation P02790 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0912814 1.6E-28
Josephine Robertson 41361833 DNA methylation P01742 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0855014 3.2E-25
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg03492874 chr8:145649623 VPS28 0.024 1.8E-22
Yao C 33752734 DNA methylation Gene expression of Affymetrix ID: 3158609 (gene symbol: VPS28) Whole blood Meta-analysis 4170 cg01556929 chr8:145654081 VPS28 NA 1.9E-21
Josephine Robertson 41361833 DNA methylation P51884 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.078 3.4E-21
Josephine Robertson 41361833 DNA methylation P02671 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.07575 4E-20
Josephine Robertson 41361833 DNA methylation P04114 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.074 4.1E-19
Josephine Robertson 41361833 DNA methylation P01031 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0727883 1.1E-18
Josephine Robertson 41361833 DNA methylation P04217 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0693997 3.9E-17
Mulder RH 33450751 DNA methylation sex Whole blood Discovery 2338 cg11402303 chr8:145651541 VPS28 0.01 6.7E-16
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg14017195 chr8:145654007 VPS28 0.008 3.8E-15
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg27657489 chr8:145651799 VPS28 -0.0012 4.2E-15
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg14017195 chr8:145654007 VPS28 -6.4e-05 2.8E-13
Josephine Robertson 41361833 DNA methylation P04004 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0600442 3.4E-13
Robert F Hillary 10.1101/2023.01.10.23284387 DNA methylation Incident COPD Whole blood Basic model 17902 cg24284752 chr8:145652729 VPS28 -0.054 6.5E-13
Josephine Robertson 41361833 DNA methylation O75882 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.059 7.6E-13
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a random effect 2338 cg04043426 chr8:145649531 VPS28 0.0011 3.2E-12
Josephine Robertson 41361833 DNA methylation P04196 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.057 4.3E-12
Josephine Robertson 41361833 DNA methylation P06396 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.057 4.5E-12
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg04043426 chr8:145649531 VPS28 -0.00098 1.6E-11
Josephine Robertson 41361833 DNA methylation P00450 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0554502 1.8E-11
Josephine Robertson 41361833 DNA methylation P25311 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0546514 3.5E-11
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg22922403 chr8:145650096 VPS28 -0.012 4.5E-11
Petersen A-K 24014485 M32397_3-hydroxy-2-ethylpropionate DNA methylation Whole blood no snps model 1760 cg04943741 chr8:145651369 VPS28 2.2 1.7E-10
Petersen A-K 24014485 M32397_3-hydroxy-2-ethylpropionate DNA methylation Whole blood snps as covariates model 1760 cg04943741 chr8:145651369 VPS28 2.2 2.2E-10
Darina Czamara 38600394 DNA methylation sex placenta meta-analysis of robust linear regression results per cohort 746 cg08387270 chr8:145649036 VPS28 -0.1204756 2.4E-10
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg01556929 chr8:145654081 VPS28 -8.6e-05 4.5E-10
Battram T 30602389 DNA methylation Tissue Buccal cells and peripheral blood mononuclear cells EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE124366. Tissue types are buccal epithelial cells and peripheral blood mononuclear cells 215 cg27657489 chr8:145651799 VPS28 0.019 6.4E-10
Josephine Robertson 41361833 DNA methylation P02763 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0499559 1.4E-09
Josephine Robertson 41361833 DNA methylation P00740 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0498851 1.5E-09
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg03492874 chr8:145649623 VPS28 -0.00097 2.5E-09
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a random effect 2338 cg18562023 chr8:145654087 VPS28 0.00019 3.5E-09
Josephine Robertson 41361833 DNA methylation P06727 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.049 3.8E-09
Josephine Robertson 41361833 DNA methylation P02751 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.048 7E-09
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg22645030 chr8:145649678 VPS28 -0.00096 7.7E-09
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg27034450 chr8:145649435 VPS28 -0.0013 9.1E-09
Knijnenburg 30833390 DNA methylation very early preterm birth (<28 weeks) whole blood discovery 784 cg04943741 chr8:145651369 VPS28 0.36 1.6E-08
Li M 33279932 DNA methylation Schizophrenia Whole blood main 999 cg00029831 chr8:145653349 VPS28 0.003 1.8E-08
Josephine Robertson 41361833 DNA methylation P29622 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.046 1.8E-08
Hannah M. Smith 39706196 DNA methylation HDL cholesterol Whole blood discovery 18225 cg08387270 chr8:145649036 VPS28 -0.197768 2E-08
Josephine Robertson 41361833 DNA methylation O75636 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.046 3.4E-08
Josephine Robertson 41361833 DNA methylation P00734 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.045 6.3E-08
Mulder RH 33450751 DNA methylation sex Whole blood Discovery 2338 cg04943741 chr8:145651369 VPS28 0.0084 7.1E-08
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a random effect 2338 cg22922403 chr8:145650096 VPS28 0.00094 8.2E-08
Hannah M. Smith 39706196 DNA methylation HDL cholesterol Whole blood discovery 18225 cg01467592 chr8:145649356 VPS28 -0.196378 1.1E-07
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a random effect 2338 cg22645030 chr8:145649678 VPS28 0.0011 1.1E-07
Josephine Robertson 41361833 DNA methylation P27169 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.044 1.1E-07
Gross AM 27105112 DNA methylation HIV infection Whole blood Discovery 181 cg14017195 chr8:145654007 VPS28 1.4 1.2E-07
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg02226871 chr8:145653662 VPS28 0.00011 1.6E-07
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 9y with age as a random effect 2338 cg04043426 chr8:145649531 VPS28 0.0034 5.9E-07
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a random effect 2338 cg27034450 chr8:145649435 VPS28 0.0015 6.3E-07
Hannah M. Smith 39706196 DNA methylation HDL cholesterol Whole blood discovery 18225 cg27657489 chr8:145651799 VPS28 -0.207356 7.1E-07
Li M 33279932 DNA methylation Schizophrenia Whole blood adjusted for cell composition 999 cg00029831 chr8:145653349 VPS28 NA 8.3E-07
Battram T 27886173 DNA methylation Crohn's disease Whole blood EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE87640 161 cg22918572 chr8:145654090 VPS28 0.0042 1E-06
Josephine Robertson 41361833 DNA methylation A0A075B6I1 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0401186 1.2E-06
Josephine Robertson 41361833 DNA methylation P02775 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0395455 1.7E-06
Dunn E 30905381 DNA methylation Neighhorhood Disadvantage Leukocytes Adversity was experienced between ages 1.5 years and 7 years old 774 cg22918572 chr8:145654090 VPS28 NA 1.8E-06
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 9y with age as a random effect 2338 cg22922403 chr8:145650096 VPS28 0.0031 2.1E-06
Hannah M. Smith 39706196 DNA methylation BMI Whole blood discovery 17304 cg01467592 chr8:145649356 VPS28 0.18 2.3E-06
Josephine Robertson 41361833 DNA methylation P55056 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.039 2.6E-06
Josephine Robertson 41361833 DNA methylation P02748 whole blood OSCA model 3 14671 cg04943741 chr8:145651369 VPS28 -0.0844462 2.9E-06
Josephine Robertson 41361833 DNA methylation P02748 whole blood OSCA model 2 14671 cg04943741 chr8:145651369 VPS28 -0.0844034 3E-06
Gross AM 27105112 DNA methylation HIV infection Neutrophils Neutrophils 60 cg00179423 chr8:145653749 VPS28 -0.361242 3.7E-06
Mooney M. 32066674 DNA methylation Attention deficit hyperactivity disorder Saliva ADHD vs. control 604 cg27034450 chr8:145649435 VPS28 0.0072 4.8E-06
Josephine Robertson 41361833 DNA methylation P18428 whole blood OSCA model 1 14671 cg27657489 chr8:145651799 VPS28 0.038 5.1E-06
Josephine Robertson 41361833 DNA methylation P19827 whole blood OSCA model 4 14671 cg04943741 chr8:145651369 VPS28 -0.103066 7.2E-06
Josephine Robertson 41361833 DNA methylation P02649 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.037 7.4E-06
Bohlin J 27717397 DNA methylation Gestational age Cord blood Last menstrual period-estimated gestational age 1068 cg04943741 chr8:145651369 VPS28 -0.00084053 9.1E-06
Dugue P-A 31789449 Alcohol consumption DNA methylation Whole blood Previous decade consumption discovery 5606 cg11402303 chr8:145651541 VPS28 NA 9.1E-06
Hannah M. Smith 39706196 DNA methylation BMI Whole blood discovery 17304 cg27657489 chr8:145651799 VPS28 0.19 1E-05
Josephine Robertson 41361833 DNA methylation P43652 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.036 1.1E-05
Josephine Robertson 41361833 DNA methylation P02671 whole blood OSCA model 4 14671 cg04943741 chr8:145651369 VPS28 0.099 1.5E-05
Hannah M. Smith 39706196 DNA methylation HDL cholesterol Whole blood discovery 18225 cg00179423 chr8:145653749 VPS28 0.13 1.6E-05
Josephine Robertson 41361833 DNA methylation P14151 whole blood OSCA model 3 14671 cg24284752 chr8:145652729 VPS28 -0.0355128 1.9E-05
Witt S 32080920 DNA methylation alcohol withdrawal recovery whole blood discovery 99 cg04943741 chr8:145651369 VPS28 1.2 2.1E-05
Kazmi N 31230546 DNA methylation Hypertensive disorders of pregnancy Cord blood Meta analysis unadjusted model 5242 cg04943741 chr8:145651369 VPS28 0.013 2.3E-05
Gadd DA 35945220 KLKB1 protein levels (SeqId = 4152-58) DNA methylation Whole blood SomaScan protein measurement 774 cg24284752 chr8:145652729 VPS28 0.86 2.5E-05
Panni T 26731791 DNA methylation Air pollution exposure Whole blood 28-day trailing average particle matter concentration 2956 cg03492874 chr8:145649623 VPS28 0.0036 2.9E-05
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 9y with age as a random effect 2338 cg27034450 chr8:145649435 VPS28 0.0047 3.2E-05
Josephine Robertson 41361833 DNA methylation Q9BXR6 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0341277 3.6E-05
Josephine Robertson 41361833 DNA methylation P04275 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 -0.0341143 3.6E-05
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 9y with age as a random effect 2338 cg22645030 chr8:145649678 VPS28 0.0035 3.8E-05
Gadd DA 35945220 CST4 protein levels (SeqId = 14076-74) DNA methylation Whole blood SomaScan protein measurement 774 cg02226871 chr8:145653662 VPS28 -0.75 3.9E-05
Mulder RH 33450751 DNA methylation age Whole blood Model 1 with age as a fixed effect 2338 cg08387270 chr8:145649036 VPS28 -0.00079 4E-05
Battram T 30291105 DNA methylation Age Colon, rectum EWAS Catalog re-analysis of GEO data. GEO accession ID is GSE113904 232 cg08387270 chr8:145649036 VPS28 -0.00082 4.1E-05
Josephine Robertson 41361833 DNA methylation P02671 whole blood OSCA model 1 14671 cg00029831 chr8:145653349 VPS28 0.034 4.9E-05
Battram T None DNA methylation Thyroid stimulating hormone Whole blood None 681 cg22645030 chr8:145649678 VPS28 0.12 5.9E-05
Robert F. Hillary doi.org/10.1101/2023.11.02.23298000 C-reactive protein (CRP) levels DNA methylation Whole blood Basic model 17936 cg24284752 chr8:145652729 VPS28 -1.3 6.2E-05
Josephine Robertson 41361833 DNA methylation P04003 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.033 6.3E-05
Gross AM 27105112 DNA methylation HIV infection Neutrophils Neutrophils 60 cg04943741 chr8:145651369 VPS28 -0.151253 6.7E-05
Mulder RH 33450751 DNA methylation age Whole blood Model 2 at 6y with age as a fixed effect 2338 cg11402303 chr8:145651541 VPS28 -0.0035 7.4E-05
Josephine Robertson 41361833 DNA methylation P02748 whole blood OSCA model 1 14671 cg24284752 chr8:145652729 VPS28 -0.0326507 7.6E-05
Josephine Robertson 41361833 DNA methylation P04430 whole blood OSCA model 1 14671 cg03492874 chr8:145649623 VPS28 0.032 8.9E-05
Josephine Robertson 41361833 DNA methylation P01834 whole blood OSCA model 1 14671 cg04943741 chr8:145651369 VPS28 0.032 9.9E-05

 

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*this tab-deliminated tsv file contains the full set of associations and variables, i.e. those in the downloadable catalog.