author	consortium	pmid	date	trait	efo	analysis	source	outcome	exposure	covariates	outcome_units	exposure_units	methylation_array	tissue	further_details	n	n_cohorts	age	sex	ethnicity	cpg	chrpos	chr	pos	gene	type	beta	se	p	details	study_id
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10311104	chr7:23053899	7	23053899	FAM126A	Island	0.008043	0.001316	0.000000000975	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08752433	chr12:111016566	12	111016566	PPTC7	North shelf	0.027771	0.004551	0.00000000105	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26314722	chr1:234867300	1	234867300	-	Open sea	0.018535	0.003078	0.00000000173	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24054898	chr3:148721868	3	148721868	GYG1	Open sea	0.01641	0.00282	0.00000000591	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23684410	chr11:116897558	11	116897558	SIK3	Open sea	0.024034	0.004134	0.00000000613	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00945209	chr17:76801579	17	76801579	USP36	South shelf	0.019093	0.003328	0.00000000966	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18518074	chr11:64642316	11	64642316	EHD1	North shelf	0.022855	0.003992	0.0000000103	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09706133	chr15:68659758	15	68659758	ITGA11	Open sea	0.012349	0.002172	0.0000000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21522988	chr12:29376872	12	29376872	FAR2	Open sea	0.020614	0.003661	0.000000018	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02656560	chr17:19967600	17	19967600	-	Open sea	0.016851	0.003045	0.0000000314	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11418177	chr4:142636072	4	142636072	IL15	Open sea	0.020296	0.00368	0.000000035	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06736148	chr15:52416833	15	52416833	GNB5	Open sea	0.021429	0.003892	0.0000000368	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08655071	chr1:209928895	1	209928895	TRAF3IP3	Open sea	0.017434	0.003193	0.0000000474	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00829438	chr9:136213035	9	136213035	MED22	North shore	-0.010182	0.001871	0.0000000526	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27541604	chr1:159046451	1	159046451	AIM2	Open sea	0.016481	0.003034	0.0000000557	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03149593	chr3:136988095	3	136988095	-	Open sea	-0.012441	0.002296	0.0000000598	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14178364	chr9:37529128	9	37529128	FBXO10	Open sea	0.014366	0.002657	0.0000000643	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14038731	chr6:110732536	6	110732536	DDO	Open sea	0.014218	0.002633	0.000000067	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20737259	chr4:95038723	4	95038723	-	Open sea	-0.030877	0.005748	0.0000000779	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09470958	chr6:31055471	6	31055471	-	Open sea	0.012015	0.002242	0.0000000835	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13803727	chr9:89445247	9	89445247	-	Open sea	0.014288	0.002669	0.0000000865	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03402926	chr11:27340767	11	27340767	-	Open sea	0.01723	0.00322	0.0000000877	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07326387	chr4:44543613	4	44543613	-	Open sea	-0.020984	0.003928	0.0000000916	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00092992	chr1:33596100	1	33596100	-	South shelf	0.017956	0.003367	0.0000000969	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03665078	chr5:118689961	5	118689961	TNFAIP8	North shore	0.015755	0.002957	0.0000000998	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17327171	chr2:161156221	2	161156221	RBMS1	Open sea	0.015343	0.002883	0.000000103	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17598574	chr1:112171207	1	112171207	RAP1A	Open sea	0.014969	0.002818	0.000000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25700513	chr6:17907035	6	17907035	KIF13A	Open sea	0.016254	0.003063	0.000000112	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16704703	chr10:3509710	10	3509710	-	Open sea	0.02266	0.004273	0.000000114	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09682727	chr5:139953966	5	139953966	-	Open sea	0.016333	0.003088	0.000000123	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21890646	chr14:91816120	14	91816120	CCDC88C	Open sea	0.019653	0.003716	0.000000123	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03411579	chr12:76552736	12	76552736	-	Open sea	0.023558	0.004458	0.000000126	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15063951	chr11:13692615	11	13692615	FAR1	South shore	-0.012284	0.002331	0.000000137	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05304729	chr1:158800024	1	158800024	MNDA	Open sea	0.024022	0.004582	0.000000158	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24003273	chr1:46112691	1	46112691	RPS15AP10;GPBP1L1	Open sea	-0.024863	0.004746	0.000000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02183564	chr7:76874892	7	76874892	CCDC146	Open sea	0.017288	0.0033	0.000000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05126095	chr12:50351980	12	50351980	AQP2	North shelf	0.018442	0.003522	0.000000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04232615	chr16:56998704	16	56998704	CETP	Open sea	0.008676	0.001666	0.000000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24803637	chr21:15444237	21	15444237	-	South shore	-0.00948	0.001823	0.000000199	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02488934	chr1:156422580	1	156422580	-	North shelf	0.020699	0.003981	0.0000002	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10833838	chr17:61042718	17	61042718	-	North shore	0.016804	0.003238	0.000000211	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24918798	chr2:103432687	2	103432687	TMEM182	Open sea	-0.026892	0.005183	0.000000212	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07739398	chr12:24365132	12	24365132	SOX5;MIR920	Open sea	-0.023903	0.004611	0.000000217	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05726118	chr3:41265374	3	41265374	CTNNB1	Open sea	0.019386	0.003743	0.000000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18675847	chr4:87865779	4	87865779	AFF1	Open sea	-0.014282	0.002762	0.000000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05995496	chr6:30126535	6	30126535	TRIM10	Open sea	0.017288	0.003356	0.000000258	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03328526	chr1:155829014	1	155829014	SYT11	North shore	0.00813	0.001579	0.00000026	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23480341	chr20:43883705	20	43883705	SLPI	Open sea	0.013371	0.002598	0.000000265	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10461878	chr3:158904717	3	158904717	IQCJ	Open sea	0.017981	0.003494	0.000000266	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06180389	chr1:111436823	1	111436823	CD53	Open sea	0.021029	0.00409	0.000000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03117379	chr20:17943971	20	17943971	SNORD17;SNX5	Open sea	0.016746	0.003267	0.000000297	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17452625	chr1:145663297	1	145663297	RNF115	Open sea	-0.016328	0.0032	0.000000336	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09130043	chr8:11561283	8	11561283	GATA4	Island	0.014308	0.002805	0.000000339	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21598389	chr15:59584281	15	59584281	MYO1E	Open sea	-0.030119	0.005913	0.000000351	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02739853	chr6:159398502	6	159398502	RSPH3	Open sea	-0.019406	0.003814	0.000000362	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03655692	chr8:118636496	8	118636496	-	Open sea	0.018889	0.003713	0.000000362	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21508639	chr17:54667590	17	54667590	-	North shelf	0.018916	0.003718	0.000000363	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11821200	chr5:40685989	5	40685989	PTGER4	South shelf	0.020367	0.004013	0.000000386	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10787197	chr6:11779941	6	11779941	C6orf105	Open sea	0.019504	0.003858	0.00000043	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12178432	chr1:26049105	1	26049105	MAN1C1	Open sea	-0.02627	0.005202	0.000000441	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25811526	chr2:74570564	2	74570564	SLC4A5	Open sea	0.015113	0.002995	0.00000045	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11074362	chr9:19297575	9	19297575	DENND4C	Open sea	-0.025867	0.005126	0.000000451	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04738673	chr3:177482968	3	177482968	-	Open sea	-0.017061	0.003392	0.000000492	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03950873	chr14:60045040	14	60045040	C14orf38	South shore	0.015489	0.003083	0.000000506	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10812889	chr1:153014310	1	153014310	SPRR2D	Open sea	0.018977	0.003778	0.000000509	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14130119	chr2:121341233	2	121341233	-	North shelf	-0.024443	0.004874	0.000000531	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26635346	chr5:106453699	5	106453699	-	Open sea	-0.029864	0.005957	0.000000536	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16107640	chr17:79803698	17	79803698	P4HB	North shore	-0.009586	0.001919	0.000000584	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26076905	chr5:67522298	5	67522298	PIK3R1	Open sea	0.014797	0.002964	0.000000598	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24251448	chr8:141577100	8	141577100	EIF2C2	Open sea	-0.009078	0.001819	0.000000601	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16634901	chr11:126588272	11	126588272	KIRREL3	Open sea	-0.014421	0.00289	0.000000604	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10218777	chr3:133180261	3	133180261	BFSP2	Open sea	-0.028877	0.005788	0.000000606	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02570888	chr1:225864873	1	225864873	-	North shore	0.025983	0.005213	0.000000623	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06621080	chr1:201631166	1	201631166	NAV1	Open sea	0.018494	0.003725	0.000000689	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22148297	chr13:99910587	13	99910587	GPR18;UBAC2	Open sea	0.007028	0.001417	0.000000705	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07600998	chr1:147146108	1	147146108	-	South shelf	0.013746	0.002775	0.000000726	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26176204	chr2:236401677	2	236401677	AGAP1	North shore	0.023963	0.004838	0.00000073	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27658031	chr3:57678937	3	57678937	FAM116A	Island	0.004739	0.000957	0.000000735	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22040158	chr1:112527540	1	112527540	KCND3	South shelf	0.013449	0.002717	0.000000744	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26959655	chr8:103379529	8	103379529	UBR5	Open sea	0.013187	0.002665	0.000000749	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06454464	chr8:143427921	8	143427921	TSNARE1	North shore	-0.010957	0.002215	0.000000758	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17680696	chr10:116192887	10	116192887	ABLIM1	Open sea	-0.009306	0.001884	0.000000785	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08551248	chr1:40255129	1	40255129	BMP8B	Island	0.008581	0.00174	0.000000809	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10938899	chr13:45710931	13	45710931	GTF2F2	Open sea	-0.02314	0.004693	0.000000819	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07442040	chr5:169289365	5	169289365	DOCK2	Open sea	-0.02323	0.004713	0.000000826	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16489360	chr7:129845574	7	129845574	TMEM209	South shore	0.020084	0.004082	0.000000864	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14485357	chr10:72201484	10	72201484	NODAL	South shore	0.013004	0.002643	0.000000869	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15485496	chr19:51775111	19	51775111	-	South shore	-0.009815	0.001996	0.000000881	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14214460	chr2:144703795	2	144703795	GTDC1	Open sea	-0.018412	0.003747	0.000000891	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12044923	chr4:5207312	4	5207312	STK32B	Open sea	0.013284	0.002703	0.000000891	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14646983	chr9:34602974	9	34602974	-	Open sea	0.011133	0.002266	0.000000897	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21463790	chr7:14025907	7	14025907	ETV1	North shelf	-0.016704	0.003401	0.000000902	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15586341	chr10:73899798	10	73899798	ASCC1	Open sea	-0.02235	0.004558	0.000000941	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22569154	chr5:147088445	5	147088445	JAKMIP2	Open sea	-0.022058	0.004505	0.000000975	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10798745	chr1:145715636	1	145715636	CD160	South shore	0.020691	0.004232	0.00000101	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20077042	chr11:65582810	11	65582810	-	North shelf	-0.009365	0.001915	0.00000101	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03839714	chr10:31361534	10	31361534	-	Open sea	-0.021069	0.004311	0.00000102	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08335583	chr16:28857735	16	28857735	TUFM	Island	0.004648	0.000952	0.00000104	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18234973	chr1:60031255	1	60031255	FGGY	Open sea	-0.008883	0.00182	0.00000106	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00013349	chr1:77049380	1	77049380	ST6GALNAC3	Open sea	-0.023478	0.004815	0.00000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17829914	chr5:72385895	5	72385895	FCHO2	Open sea	-0.024903	0.005107	0.00000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01177470	chr6:27870695	6	27870695	-	Open sea	0.020303	0.004163	0.00000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13551229	chr9:139762139	9	139762139	EDF1	South shore	-0.009698	0.001989	0.00000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20021513	chr14:24438136	14	24438136	DHRS4	North shore	-0.008536	0.00175	0.00000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18700744	chr12:112534559	12	112534559	NAA25	Open sea	0.017832	0.003658	0.00000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24002522	chr3:105247852	3	105247852	ALCAM	Open sea	-0.015776	0.003241	0.00000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16671238	chr13:20987145	13	20987145	CRYL1	North shore	0.011807	0.002426	0.00000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22007739	chr1:155305329	1	155305329	ASH1L	Open sea	-0.024974	0.005136	0.00000116	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04930463	chr17:79234445	17	79234445	SLC38A10	North shore	-0.01202	0.002473	0.00000117	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16587006	chr16:1726892	16	1726892	HN1L;CRAMP1L	North shore	-0.008608	0.001771	0.00000118	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20765441	chr6:25931659	6	25931659	SLC17A2	Open sea	0.021693	0.004466	0.00000119	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14214182	chr9:98785110	9	98785110	NCRNA00092	South shore	0.008495	0.001749	0.00000119	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25488990	chr12:65668614	12	65668614	-	North shelf	0.014569	0.003	0.0000012	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04409872	chr6:167432504	6	167432504	FGFR1OP	Open sea	-0.019868	0.004093	0.00000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14655858	chr8:37978472	8	37978472	ASH2L	Open sea	-0.01903	0.003922	0.00000122	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26878209	chr10:112375475	10	112375475	-	Open sea	0.017807	0.00367	0.00000122	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11971423	chr17:46653711	17	46653711	HOXB4	North shore	-0.018652	0.003848	0.00000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05290708	chr7:140372864	7	140372864	ADCK2	Island	0.007844	0.001619	0.00000127	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05916783	chr16:81348309	16	81348309	GAN	North shore	0.004862	0.001004	0.00000127	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21120249	chr9:139921971	9	139921971	C9orf139;ABCA2	North shore	-0.017685	0.003653	0.00000129	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14662009	chr12:50300243	12	50300243	-	South shelf	0.013417	0.002771	0.00000129	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17802220	chr15:77601643	15	77601643	-	Open sea	-0.021182	0.004375	0.00000129	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10344369	chr11:31846622	11	31846622	-	North shore	0.014165	0.002927	0.0000013	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16197879	chr21:37839328	21	37839328	CLDN14	Open sea	-0.009806	0.002027	0.00000132	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01750221	chr12:109985316	12	109985316	-	Open sea	-0.026402	0.005465	0.00000136	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15981982	chr2:8685837	2	8685837	-	Open sea	0.017551	0.003636	0.00000139	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03008815	chr14:75372636	14	75372636	RPS6KL1	Open sea	0.015227	0.003155	0.00000139	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17493391	chr2:223809219	2	223809219	-	Open sea	-0.017015	0.003535	0.00000148	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17694130	chr4:14858290	4	14858290	-	Open sea	0.018425	0.003827	0.00000148	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04463911	chr6:168073237	6	168073237	-	Open sea	-0.018413	0.003826	0.00000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24004007	chr15:63889250	15	63889250	FBXL22	North shelf	-0.009758	0.002028	0.0000015	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20994118	chr1:209780966	1	209780966	CAMK1G	Open sea	0.014856	0.003089	0.00000151	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21163972	chr1:202114946	1	202114946	ARL8A	South shore	0.010449	0.002174	0.00000153	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19755435	chr14:88473001	14	88473001	GPR65	Open sea	0.025161	0.005238	0.00000156	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10073696	chr12:19660393	12	19660393	AEBP2	Open sea	-0.009202	0.001916	0.00000157	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25279613	chr7:24956523	7	24956523	OSBPL3	Open sea	0.018509	0.003855	0.00000158	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06802985	chr5:179341359	5	179341359	-	Open sea	0.015633	0.003257	0.00000159	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14938410	chr1:150521562	1	150521562	ADAMTSL4	Island	0.00584	0.001217	0.00000161	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06326425	chr13:93886487	13	93886487	GPC6	Open sea	0.011933	0.002488	0.00000161	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19361615	chr7:80372286	7	80372286	SEMA3C	Open sea	-0.018691	0.003897	0.00000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17852482	chr17:80833054	17	80833054	TBCD	South shelf	0.013525	0.00282	0.00000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11046602	chr17:47695458	17	47695458	SPOP	Open sea	0.016506	0.003444	0.00000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01027532	chr7:27155974	7	27155974	HOXA3	South shore	0.010868	0.00227	0.00000168	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13716074	chr7:65215894	7	65215894	CCT6P1	Island	0.005246	0.001096	0.00000169	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20683445	chr10:12853879	10	12853879	CAMK1D	Open sea	-0.010175	0.002125	0.00000169	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05862438	chr7:142920096	7	142920096	TAS2R40	Open sea	0.013108	0.002739	0.0000017	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04949225	chr13:50796845	13	50796845	-	Open sea	0.017623	0.003682	0.0000017	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06483802	chr13:43169237	13	43169237	TNFSF11	Open sea	0.009765	0.002041	0.00000171	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05287817	chr3:186080015	3	186080015	DGKG	Island	0.005709	0.001194	0.00000174	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13823234	chr9:93800582	9	93800582	-	Open sea	-0.009794	0.002048	0.00000174	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08080174	chr16:72992580	16	72992580	ZFHX3	North shore	0.015445	0.003232	0.00000177	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20730966	chr3:33095886	3	33095886	GLB1	Open sea	0.016011	0.003352	0.00000179	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10806645	chr2:238640512	2	238640512	LRRFIP1	North shelf	0.014276	0.00299	0.0000018	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15978017	chr13:29042758	13	29042758	FLT1	Open sea	0.012416	0.002601	0.00000181	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12763430	chr10:2247630	10	2247630	-	Open sea	0.02273	0.004764	0.00000183	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12288982	chr11:599052	11	599052	PHRF1	South shore	-0.015643	0.003281	0.00000186	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14234112	chr6:32862402	6	32862402	-	Island	0.005852	0.001228	0.00000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20975182	chr1:32207700	1	32207700	BAI2	North shore	-0.018716	0.003929	0.0000019	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06922393	chr11:72064370	11	72064370	CLPB	Open sea	0.013956	0.00293	0.00000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12632097	chr22:17849926	22	17849926	-	Island	0.007219	0.001516	0.00000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25063631	chr7:155025500	7	155025500	-	Open sea	-0.010721	0.002251	0.00000192	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21113318	chr14:92983645	14	92983645	RIN3	South shelf	0.014686	0.003084	0.00000192	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00830621	chr16:18799106	16	18799106	RPS15A	North shelf	0.014456	0.003037	0.00000194	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09676013	chr6:33080500	6	33080500	HLA-DPB2	Open sea	0.021893	0.004601	0.00000195	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25436157	chr18:21018562	18	21018562	C18orf45	South shore	0.014901	0.003131	0.00000195	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08385211	chr10:50118141	10	50118141	LRRC18;WDFY4	Open sea	-0.012896	0.002711	0.00000196	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15990658	chr1:76396165	1	76396165	ASB17	Open sea	-0.021803	0.004588	0.00000201	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23178364	chr2:165425105	2	165425105	GRB14	Open sea	-0.014237	0.002997	0.00000203	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11821927	chr15:45694435	15	45694435	SPATA5L1	Island	0.004247	0.000894	0.00000205	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08798307	chr7:141190187	7	141190187	-	Open sea	0.017778	0.003746	0.00000207	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13533142	chr19:2255493	19	2255493	JSRP1	South shore	-0.00906	0.001909	0.00000207	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19071367	chr11:66036015	11	66036015	RAB1B	Island	0.003877	0.000817	0.00000208	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04141141	chr5:54777774	5	54777774	PPAP2A	Open sea	-0.032946	0.006946	0.0000021	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17902290	chr1:18060406	1	18060406	-	Open sea	0.018086	0.003814	0.00000212	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15087178	chr10:61946556	10	61946556	ANK3	Open sea	-0.007078	0.001494	0.00000216	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08532325	chr5:141082246	5	141082246	-	Island	0.005653	0.001193	0.00000217	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14937059	chr7:94248343	7	94248343	SGCE	Open sea	-0.029961	0.006327	0.00000219	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09504612	chr10:116467988	10	116467988	-	Open sea	0.01413	0.002984	0.00000219	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14128068	chr9:96590527	9	96590527	-	South shore	-0.012602	0.002663	0.00000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05954147	chr7:126417956	7	126417956	GRM8	Open sea	-0.024032	0.00508	0.00000224	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06844012	chr3:159944430	3	159944430	LOC401097	Island	0.006052	0.00128	0.00000225	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08271907	chr8:142250257	8	142250257	-	Open sea	0.019572	0.004141	0.00000229	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23239637	chr2:1507832	2	1507832	TPO	Open sea	0.006195	0.001313	0.00000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24000860	chr10:81206436	10	81206436	ZCCHC24	South shore	0.009545	0.002022	0.00000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24526843	chr6:32081263	6	32081263	-	Open sea	-0.010588	0.002245	0.0000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26470175	chr8:126540934	8	126540934	-	Open sea	0.015298	0.003243	0.0000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06985880	chr7:108525723	7	108525723	C7orf66	Open sea	-0.026853	0.005697	0.00000243	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07830855	chr6:56524142	6	56524142	DST	Open sea	0.01583	0.00336	0.00000247	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20610950	chr17:75096202	17	75096202	-	Open sea	0.024154	0.005128	0.00000247	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09502149	chr1:43406792	1	43406792	SLC2A1	Open sea	0.012791	0.002716	0.00000249	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10984017	chr2:121010993	2	121010993	RALB	Island	0.005922	0.001258	0.00000252	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01908272	chr16:2053627	16	2053627	ZNF598	North shore	-0.007485	0.001591	0.00000254	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01956717	chr19:55866635	19	55866635	FAM71E2;COX6B2	South shore	0.006887	0.001465	0.00000259	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20846148	chr13:103412503	13	103412503	LOC643677	Open sea	-0.022055	0.004693	0.00000261	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18007641	chr4:74641828	4	74641828	-	Open sea	-0.029733	0.006328	0.00000262	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23378144	chr11:61659518	11	61659518	FADS3	Island	0.006773	0.001442	0.00000262	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11952914	chr1:8800647	1	8800647	RERE	Open sea	-0.018183	0.00387	0.00000263	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17844898	chr13:115011935	13	115011935	CDC16	Open sea	-0.009029	0.001923	0.00000266	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15466245	chr1:155028224	1	155028224	ADAM15	South shelf	-0.010131	0.002159	0.00000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07258627	chr20:4721683	20	4721683	PRNT	Open sea	0.011477	0.002445	0.00000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03020424	chr3:148581801	3	148581801	CPA3	Open sea	0.014846	0.003164	0.00000271	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05515099	chr3:69482656	3	69482656	-	Open sea	0.01539	0.003281	0.00000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27368523	chr2:113544348	2	113544348	IL1A	Open sea	0.015709	0.003351	0.00000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06914774	chr7:2908787	7	2908787	-	Open sea	-0.020363	0.004344	0.00000277	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15275393	chr6:162067688	6	162067688	PARK2	Island	0.01525	0.003259	0.00000287	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03295554	chr11:128395450	11	128395450	ETS1	South shelf	-0.025526	0.005457	0.0000029	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00940020	chr17:46101547	17	46101547	-	Island	0.006135	0.001312	0.0000029	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08903181	chr12:89018232	12	89018232	-	Open sea	0.012357	0.002642	0.00000291	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26948596	chr14:93078627	14	93078627	RIN3	Open sea	-0.009657	0.002066	0.00000294	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03746015	chr16:11141000	16	11141000	CLEC16A	Open sea	-0.02718	0.005817	0.00000297	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09306340	chr1:161068039	1	161068039	KLHDC9	North shore	0.006719	0.001438	0.00000298	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26250228	chr2:166700068	2	166700068	-	Open sea	-0.022107	0.004732	0.00000299	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17980786	chr3:32933637	3	32933637	TRIM71	Open sea	0.013712	0.002935	0.00000299	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02036430	chr5:80992249	5	80992249	SSBP2	Open sea	-0.025568	0.005481	0.00000309	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11719784	chr1:203058954	1	203058954	-	Open sea	-0.009962	0.002137	0.00000312	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08871467	chr9:104161367	9	104161367	MRPL50;ZNF189	Island	0.006702	0.001438	0.00000316	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06669036	chr4:184124473	4	184124473	WWC2	Open sea	-0.009072	0.001947	0.00000318	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25758137	chr3:105145478	3	105145478	ALCAM	Open sea	-0.020191	0.004335	0.0000032	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19737225	chr19:17392320	19	17392320	ANKLE1	North shore	0.020899	0.004491	0.00000326	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00395931	chr1:2158622	1	2158622	-	Island	0.006463	0.00139	0.00000332	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23740474	chr11:70455140	11	70455140	SHANK2	Open sea	0.020575	0.004425	0.00000332	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03160815	chr17:79859830	17	79859830	NPB	Island	0.014554	0.00313	0.00000333	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10923036	chr4:57931299	4	57931299	IGFBP7	Open sea	0.015906	0.003422	0.00000334	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04819337	chr21:44982367	21	44982367	HSF2BP	North shelf	0.01348	0.002902	0.0000034	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10991454	chr2:30834674	2	30834674	LCLAT1	Open sea	0.015063	0.003244	0.00000342	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02002538	chr5:17811409	5	17811409	-	Open sea	-0.016579	0.003572	0.00000345	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16292851	chr18:29710780	18	29710780	RNF138	Open sea	-0.024804	0.005344	0.00000346	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07184887	chr1:89615433	1	89615433	GBP7	Open sea	-0.015329	0.003304	0.00000348	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15059548	chr7:47344634	7	47344634	TNS3	Open sea	0.016375	0.003531	0.00000353	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07152379	chr15:44159857	15	44159857	WDR76	Open sea	-0.022066	0.00476	0.00000356	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07195224	chr1:159047034	1	159047034	AIM2	Open sea	0.014707	0.003173	0.00000357	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03275648	chr9:96940848	9	96940848	MIRLET7D	Open sea	0.013356	0.002882	0.00000358	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25928521	chr11:14893339	11	14893339	PDE3B	Open sea	-0.024314	0.00525	0.00000363	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04708391	chr4:175177265	4	175177265	FBXO8	Open sea	-0.021061	0.004548	0.00000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06036471	chr10:93861385	10	93861385	CPEB3	Open sea	0.014646	0.003163	0.00000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09365677	chr1:240061611	1	240061611	CHRM3	Open sea	0.009479	0.002047	0.00000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04350627	chr7:82993656	7	82993656	SEMA3E	Open sea	-0.019842	0.004286	0.00000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19755016	chr1:183261947	1	183261947	NMNAT2	Open sea	0.014296	0.003088	0.00000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23993660	chr1:20959826	1	20959826	PINK1	North shore	0.00722	0.00156	0.00000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01989731	chr5:112861277	5	112861277	YTHDC2	Open sea	-0.02067	0.004465	0.00000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08966978	chr10:90640001	10	90640001	STAMBPL1	Island	0.005831	0.00126	0.00000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09555947	chr3:19440409	3	19440409	KCNH8	Open sea	-0.018076	0.003906	0.0000037	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06589161	chr5:180618230	5	180618230	-	Island	0.012767	0.00276	0.00000374	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03589557	chr11:71164283	11	71164283	NADSYN1	Island	0.006083	0.001315	0.00000374	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05463155	chr3:58419697	3	58419697	PDHB	Island	0.005488	0.001187	0.00000378	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24718015	chr17:40489721	17	40489721	STAT3	Open sea	0.017041	0.003686	0.00000378	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21645089	chr6:39072458	6	39072458	C6orf64	Open sea	0.013662	0.002956	0.0000038	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11236746	chr3:33096255	3	33096255	GLB1	Open sea	0.017155	0.003714	0.00000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17251713	chr18:61443038	18	61443038	SERPINB7	Open sea	0.017058	0.003693	0.00000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16228380	chr8:126964551	8	126964551	-	Open sea	-0.013718	0.002971	0.00000388	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21172159	chr6:130342381	6	130342381	L3MBTL3	Island	0.006651	0.00144	0.00000389	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08776331	chr16:2125989	16	2125989	TSC2	Island	-0.008505	0.001842	0.00000389	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01717524	chr1:120204880	1	120204880	-	Open sea	0.013357	0.002894	0.00000392	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22365446	chr7:1885050	7	1885050	MAD1L1	Island	-0.013851	0.003001	0.00000393	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14366598	chr14:23841754	14	23841754	IL25	Open sea	0.016709	0.003622	0.00000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24715815	chr2:183642235	2	183642235	DNAJC10	Open sea	-0.014278	0.003096	0.00000399	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00252934	chr3:36782736	3	36782736	DCLK3	Open sea	0.012346	0.002678	0.00000401	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04245026	chr10:1510077	10	1510077	ADARB2	South shelf	0.025122	0.005451	0.00000405	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09404643	chr6:106960600	6	106960600	AIM1	Island	0.004977	0.00108	0.00000406	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15508749	chr4:109115092	4	109115092	-	Open sea	-0.022602	0.00491	0.00000416	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05419385	chr12:27352945	12	27352945	-	Open sea	0.011006	0.002391	0.00000416	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01770019	chr1:11042161	1	11042161	C1orf127	Open sea	0.012731	0.002766	0.00000417	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14287546	chr9:134919163	9	134919163	MED27	Open sea	-0.014714	0.003197	0.00000417	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08446539	chr12:25541565	12	25541565	-	South shelf	0.014129	0.003073	0.00000428	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25064331	chr7:33080500	7	33080500	NT5C3	Open sea	0.007574	0.001649	0.00000437	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02784696	chr2:24270586	2	24270586	C2orf44	North shore	0.013626	0.002967	0.00000438	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16719845	chr2:7005449	2	7005449	CMPK2	Island	0.007578	0.00165	0.00000439	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25812095	chr2:144998514	2	144998514	GTDC1	Open sea	0.013255	0.002887	0.0000044	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04276057	chr2:233736931	2	233736931	C2orf82	North shelf	-0.010328	0.002251	0.00000448	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00814597	chr6:144386148	6	144386148	PLAGL1	South shore	0.006851	0.001494	0.00000452	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12469257	chr3:25761040	3	25761040	NGLY1	Open sea	-0.024497	0.005345	0.00000457	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13293296	chr2:99216068	2	99216068	C2orf64	Open sea	-0.025459	0.005555	0.00000459	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27280535	chr8:8746679	8	8746679	MFHAS1	North shore	0.016154	0.003525	0.0000046	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14849855	chr1:67807960	1	67807960	IL12RB2	Open sea	0.013947	0.003045	0.00000465	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00236249	chr22:20789017	22	20789017	SCARF2	North shore	-0.007841	0.001714	0.00000474	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07993586	chr7:157204960	7	157204960	DNAJB6	North shore	0.012829	0.002804	0.00000476	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23396403	chr5:94890852	5	94890852	ARSK;TTC37	Island	0.005163	0.001129	0.00000479	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16314369	chr4:185655609	4	185655609	MLF1IP	South shore	0.005441	0.00119	0.0000048	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14751503	chr11:8008354	11	8008354	EIF3F	North shore	0.008538	0.001867	0.0000048	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06707286	chr15:102010195	15	102010195	PCSK6	Open sea	-0.009122	0.001995	0.0000048	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00369658	chr11:57365088	11	57365088	SERPING1	Open sea	0.011796	0.00258	0.00000482	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18169800	chr12:94916291	12	94916291	-	Open sea	-0.021754	0.004759	0.00000484	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22129276	chr2:169926103	2	169926103	DHRS9	Open sea	0.012913	0.002826	0.0000049	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15584968	chr4:102154513	4	102154513	PPP3CA	Open sea	-0.016191	0.003544	0.0000049	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06911110	chr1:17293971	1	17293971	CROCC	South shore	-0.018431	0.004035	0.00000492	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04753107	chr20:31172130	20	31172130	-	Island	0.007209	0.001578	0.00000494	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03961030	chr1:6333796	1	6333796	ACOT7	Open sea	-0.009184	0.002012	0.00000502	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06127885	chr15:45421068	15	45421068	DUOX1;DUOXA1	North shore	0.015665	0.003433	0.00000505	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00101436	chr7:90755643	7	90755643	CDK14	Open sea	-0.020966	0.004596	0.00000507	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05376505	chr12:3602286	12	3602286	PRMT8	Island	0.007025	0.00154	0.00000507	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14198101	chr19:1270276	19	1270276	CIRBP;C19orf23	South shore	0.003497	0.000767	0.00000513	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01900548	chr6:170455570	6	170455570	-	South shore	-0.012047	0.002643	0.00000516	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02396914	chr8:120743868	8	120743868	TAF2	Open sea	-0.026472	0.005809	0.00000519	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06715755	chr7:158244406	7	158244406	PTPRN2	North shelf	-0.015146	0.003325	0.00000524	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00115567	chr6:44279361	6	44279361	AARS2	North shore	-0.007929	0.001741	0.00000526	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06147361	chr12:24689930	12	24689930	SOX5	Open sea	0.01045	0.002295	0.00000527	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05645787	chr13:101285074	13	101285074	TMTC4	Open sea	-0.016203	0.003558	0.00000527	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10517312	chr15:45027253	15	45027253	TRIM69	Open sea	0.013677	0.003004	0.0000053	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13002809	chr4:26362792	4	26362792	RBPJ	South shore	0.013182	0.002896	0.00000532	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10339344	chr11:60674203	11	60674203	PRPF19	South shore	0.003512	0.000772	0.00000534	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01403010	chr22:38609534	22	38609534	MAFF	North shore	0.010466	0.002303	0.00000552	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06648495	chr7:150746006	7	150746006	ACCN3	Island	-0.007375	0.001624	0.00000561	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07452799	chr10:35103869	10	35103869	PARD3	Island	0.007189	0.001583	0.00000561	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21196942	chr4:140357489	4	140357489	-	Island	-0.015376	0.003387	0.00000564	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11404296	chr12:89603597	12	89603597	-	Open sea	-0.022114	0.004873	0.00000567	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09174555	chr1:153364020	1	153364020	S100A8	Open sea	0.015085	0.003325	0.00000571	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07611843	chr7:128453143	7	128453143	CCDC136	Open sea	0.017236	0.003799	0.00000571	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05128386	chr16:47409367	16	47409367	ITFG1	Open sea	-0.027707	0.006107	0.00000571	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10117884	chr1:166955898	1	166955898	-	North shelf	-0.018745	0.004132	0.00000573	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05512620	chr4:80775399	4	80775399	GDEP	Open sea	-0.011918	0.002628	0.00000575	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04222933	chr1:160783181	1	160783181	LY9	Open sea	0.023738	0.005235	0.00000578	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04287259	chr1:9730401	1	9730401	PIK3CD	Open sea	0.015895	0.003506	0.0000058	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05325699	chr17:39890756	17	39890756	HAP1	Island	0.006655	0.001468	0.00000583	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21113478	chr3:36782467	3	36782467	DCLK3	Open sea	0.01811	0.003996	0.00000585	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12524168	chr5:76028910	5	76028910	F2R	Open sea	0.013156	0.002903	0.00000586	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19865916	chr1:36026194	1	36026194	NCDN	South shelf	-0.012204	0.002694	0.00000588	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18762125	chr3:194646995	3	194646995	-	Open sea	-0.022293	0.004925	0.00000599	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20346726	chr11:101918403	11	101918403	C11orf70	Island	0.007841	0.001732	0.00000599	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10484965	chr2:172524214	2	172524214	-	Open sea	-0.02415	0.005337	0.00000603	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10362113	chr14:96978537	14	96978537	PAPOLA	Open sea	-0.024475	0.00541	0.00000608	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23292259	chr14:39702965	14	39702965	MIA2	Open sea	-0.01621	0.003584	0.00000609	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04980793	chr14:35451984	14	35451984	SRP54	Island	0.006114	0.001352	0.00000614	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10796131	chr12:30484029	12	30484029	-	Open sea	-0.023124	0.005115	0.00000615	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13615650	chr11:118123083	11	118123083	MPZL3	Open sea	0.006498	0.001438	0.00000619	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14422906	chr6:51951835	6	51951835	PKHD1	Open sea	-0.009191	0.002034	0.00000622	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22583147	chr3:44331824	3	44331824	C3orf77	Open sea	0.015341	0.003395	0.00000623	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24817430	chr15:81294299	15	81294299	MESDC1	Island	0.006679	0.001479	0.00000628	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00700638	chr16:84828558	16	84828558	-	Open sea	-0.008237	0.001824	0.00000628	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03680898	chr3:93646378	3	93646378	PROS1	Open sea	-0.017764	0.003933	0.00000629	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13359998	chr1:230241764	1	230241764	GALNT2	Open sea	0.015857	0.003512	0.00000632	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12014368	chr21:33664211	21	33664211	MRAP	Open sea	-0.028036	0.006209	0.00000632	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07346603	chr5:169659751	5	169659751	C5orf58	North shore	-0.007795	0.001727	0.00000641	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27473073	chr8:67996256	8	67996256	CSPP1	Open sea	-0.02425	0.005374	0.00000641	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19652483	chr6:76191813	6	76191813	FILIP1	Open sea	0.019044	0.004221	0.00000644	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10965575	chr2:182321496	2	182321496	ITGA4	North shore	0.003975	0.000881	0.00000646	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04764907	chr10:126842580	10	126842580	CTBP2	South shore	0.021729	0.00482	0.00000653	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00936935	chr10:52271899	10	52271899	SGMS1	Open sea	0.012405	0.002752	0.00000654	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03339016	chr22:19279085	22	19279085	CLTCL1	Island	0.006263	0.001389	0.00000654	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09260653	chr16:1486064	16	1486064	CCDC154	North shore	-0.00987	0.002192	0.00000671	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00005817	chr4:75168741	4	75168741	MTHFD2L	Open sea	-0.018629	0.004138	0.00000673	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12833451	chr3:33729800	3	33729800	CLASP2	Open sea	-0.026163	0.005813	0.00000676	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10621597	chr4:140481801	4	140481801	-	South shelf	0.010932	0.00243	0.00000682	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06903103	chr15:34506071	15	34506071	-	South shelf	0.018356	0.004081	0.00000686	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10437839	chr11:64701910	11	64701910	PPP2R5B	Open sea	0.016951	0.003771	0.00000696	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03910874	chr6:209712	6	209712	-	Open sea	0.013941	0.003102	0.00000698	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01477933	chr12:122922107	12	122922107	-	Open sea	0.014451	0.003216	0.00000703	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09862509	chr1:181069576	1	181069576	-	Open sea	0.013334	0.002968	0.00000704	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04757239	chr7:44198380	7	44198380	GCK	Open sea	-0.009645	0.002148	0.00000711	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10662603	chr3:68992252	3	68992252	-	Open sea	-0.017765	0.003958	0.00000716	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18446044	chr11:57092605	11	57092605	TNKS1BP1	Island	0.004675	0.001042	0.00000719	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22410262	chr11:64198213	11	64198213	-	Open sea	-0.008762	0.001953	0.00000724	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09935766	chr7:25219892	7	25219892	C7orf31	Island	0.007111	0.001586	0.0000073	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03347966	chr8:145582459	8	145582459	GPR172A;FBXL6	Island	0.004304	0.00096	0.0000073	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01224479	chr16:86310488	16	86310488	-	Open sea	-0.023022	0.005134	0.00000731	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13855862	chr17:78155264	17	78155264	CARD14	Island	-0.009126	0.002035	0.00000731	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10076954	chr8:136777484	8	136777484	-	Open sea	-0.016513	0.003682	0.00000732	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25741578	chr10:6622566	10	6622566	PRKCQ	Island	0.005295	0.001182	0.0000074	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09367198	chr14:23541523	14	23541523	ACIN1	Open sea	-0.025339	0.005655	0.00000744	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26358446	chr3:177281208	3	177281208	-	Open sea	-0.016628	0.003711	0.00000745	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26485844	chr5:77256916	5	77256916	-	South shelf	0.019677	0.004396	0.00000761	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12516767	chr2:133173433	2	133173433	GPR39	North shore	0.021161	0.00473	0.00000767	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25346117	chr1:116923256	1	116923256	ATP1A1	Open sea	0.015986	0.003573	0.00000769	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17404760	chr7:110658544	7	110658544	IMMP2L	Open sea	-0.022875	0.005114	0.0000077	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11003133	chr1:159046391	1	159046391	AIM2	Open sea	0.018925	0.004231	0.00000772	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16549994	chr22:36854045	22	36854045	-	South shelf	-0.012361	0.002765	0.00000778	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04802238	chr16:87873610	16	87873610	SLC7A5	Open sea	-0.010425	0.002332	0.00000781	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26728382	chr6:163848720	6	163848720	QKI	Open sea	-0.015356	0.003435	0.00000782	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16225773	chr3:33002878	3	33002878	-	Open sea	0.013327	0.002982	0.00000783	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08715914	chr12:26278128	12	26278128	BHLHE41	North shore	0.011228	0.002512	0.00000785	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10761085	chr2:3313527	2	3313527	TSSC1	Open sea	-0.008498	0.001901	0.00000786	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15552493	chr2:102387391	2	102387391	MAP4K4	Open sea	0.016792	0.003758	0.00000786	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09890987	chr5:6622150	5	6622150	NSUN2	Open sea	-0.020344	0.004553	0.00000788	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08553913	chr17:37028977	17	37028977	LASP1	South shore	0.010313	0.002308	0.00000788	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15222563	chr19:7745491	19	7745491	TRAPPC5	Island	0.008229	0.001843	0.00000797	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00089453	chr5:150003037	5	150003037	SYNPO	North shore	0.009299	0.002082	0.00000798	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02415651	chr6:164255065	6	164255065	-	North shore	-0.014175	0.003174	0.00000798	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19561007	chr5:3288637	5	3288637	-	Open sea	-0.013584	0.003044	0.00000808	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09112476	chr2:232580215	2	232580215	-	Open sea	0.008679	0.001945	0.00000811	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25462842	chr5:178547422	5	178547422	ADAMTS2	Island	-0.009583	0.002148	0.00000811	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06583605	chr4:56818360	4	56818360	CEP135	South shelf	-0.03103	0.006956	0.00000816	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19798735	chr7:110730805	7	110730805	IMMP2L;LRRN3	Open sea	-0.014356	0.003221	0.00000829	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04816311	chr7:1066650	7	1066650	C7orf50	North shore	0.023646	0.005305	0.0000083	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15312323	chr17:39317694	17	39317694	KRTAP4-4	Open sea	-0.017421	0.003908	0.0000083	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13998945	chr7:45035665	7	45035665	-	North shelf	0.010286	0.002308	0.00000831	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00302793	chr4:102268125	4	102268125	PPP3CA	Island	0.007362	0.001652	0.00000832	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20628376	chr10:28758087	10	28758087	-	Open sea	0.013103	0.00294	0.00000832	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25442607	chr18:72799150	18	72799150	-	North shore	-0.008624	0.001936	0.00000843	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07997596	chr1:3685319	1	3685319	CCDC27	North shelf	0.013932	0.003128	0.00000845	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13669804	chr3:148712659	3	148712659	GYG1	South shelf	-0.009396	0.002111	0.00000857	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04656070	chr8:116661063	8	116661063	TRPS1	South shore	-0.019378	0.004354	0.00000858	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26509254	chr6:30685303	6	30685303	MDC1	Island	0.005477	0.001231	0.00000863	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01338658	chr1:182992728	1	182992728	LAMC1	Island	0.006675	0.001501	0.00000869	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13552337	chr9:140108141	9	140108141	NDOR1	South shore	-0.009857	0.002216	0.0000087	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27105465	chr17:40337623	17	40337623	HCRT	South shore	-0.009618	0.002163	0.00000874	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26712188	chr17:26117815	17	26117815	NOS2	North shelf	-0.018219	0.004099	0.00000879	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20669525	chr8:145137896	8	145137896	GPAA1	Island	0.005909	0.00133	0.00000889	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19483007	chr3:149327651	3	149327651	WWTR1	Open sea	0.015772	0.003552	0.00000897	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19787448	chr17:69295698	17	69295698	-	Open sea	0.013766	0.0031	0.00000897	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19118972	chr3:184323327	3	184323327	-	South shore	0.012475	0.002809	0.00000898	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02118840	chr14:103811364	14	103811364	-	Open sea	-0.017669	0.003979	0.00000898	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27244379	chr3:49507291	3	49507291	DAG1	North shore	0.006305	0.00142	0.000009	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20811145	chr1:23885769	1	23885769	ID3	Island	0.004862	0.001095	0.00000901	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06169746	chr3:119419493	3	119419493	-	North shelf	0.01641	0.003696	0.00000901	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18258151	chr2:43454524	2	43454524	ZFP36L2;LOC100129726	Island	0.003555	0.000801	0.00000906	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04790761	chr1:206858062	1	206858062	MAPKAPK2	North shore	0.003803	0.000857	0.00000911	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07356123	chr6:154558509	6	154558509	IPCEF1;OPRM1	Open sea	-0.025753	0.005805	0.00000914	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07975813	chr12:6961094	12	6961094	USP5;CDCA3	Island	0.004398	0.000991	0.00000914	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22450342	chr1:181007669	1	181007669	MR1	Open sea	0.014896	0.003358	0.00000919	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13193497	chr6:159344810	6	159344810	-	Open sea	0.012831	0.002893	0.00000923	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00747187	chr7:97800068	7	97800068	LMTK2	North shore	-0.022849	0.005154	0.00000929	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13144783	chr3:46249795	3	46249795	CCR1	Open sea	0.007187	0.001621	0.00000932	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20333927	chr1:25942975	1	25942975	MAN1C1	Island	0.005817	0.001312	0.00000934	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24886356	chr5:176300261	5	176300261	UNC5A	South shelf	0.018656	0.004209	0.00000934	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27357316	chr17:37365987	17	37365987	-	Island	0.006689	0.00151	0.0000094	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01314398	chr2:85765810	2	85765810	MAT2A	Island	0.008242	0.00186	0.00000941	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06305048	chr19:53466199	19	53466199	ZNF816A	Island	0.009478	0.002139	0.00000941	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05838104	chr1:2559371	1	2559371	MMEL1	North shore	0.028958	0.006537	0.00000944	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10799327	chr3:170484840	3	170484840	-	Open sea	0.009976	0.002253	0.0000095	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08368094	chr4:74286665	4	74286665	ALB	Open sea	-0.018984	0.004287	0.0000095	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09246924	chr13:77564706	13	77564706	CLN5	North shore	-0.008127	0.001835	0.00000951	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25263135	chr6:32134974	6	32134974	EGFL8	Island	-0.008332	0.001882	0.00000957	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06013872	chr4:72203823	4	72203823	SLC4A4	Open sea	-0.015454	0.003492	0.00000964	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11038054	chr2:142338869	2	142338869	LRP1B	Open sea	0.014075	0.003181	0.00000968	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26778029	chr7:74072136	7	74072136	GTF2I	Island	0.006084	0.001375	0.0000097	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18143792	chr1:26250290	1	26250290	-	South shore	0.018663	0.004219	0.00000971	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25562664	chr3:119529148	3	119529148	NR1I2	Island	0.007981	0.001804	0.00000971	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01929314	chr4:84629827	4	84629827	-	Open sea	-0.012099	0.002736	0.00000975	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27394038	chr6:36562217	6	36562217	SFRS3	Island	0.004743	0.001072	0.00000976	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07267600	chr12:2750053	12	2750053	CACNA1C	Open sea	0.015705	0.003551	0.00000977	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09577966	chr5:55411971	5	55411971	ANKRD55	Open sea	-0.018893	0.004274	0.00000986	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06109238	chr13:99017232	13	99017232	FARP1	Open sea	-0.019858	0.004493	0.00000988	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19650755	chr12:68617143	12	68617143	IL26	Open sea	0.009451	0.002139	0.00000994	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16253551	chr6:30685136	6	30685136	MDC1	Island	0.005603	0.001269	0.00001	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00621583	chr3:41237304	3	41237304	-	North shelf	-0.015728	0.003564	0.0000102	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04281069	chr6:144508118	6	144508118	STX11	Island	-0.004193	0.000951	0.0000103	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26386044	chr2:136740676	2	136740676	DARS	North shelf	-0.018625	0.004225	0.0000104	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08529744	chr1:151818922	1	151818922	-	Open sea	0.010346	0.002348	0.0000105	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07535316	chr7:81752694	7	81752694	CACNA2D1	Open sea	0.017859	0.004053	0.0000105	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11941231	chr4:165928549	4	165928549	-	Open sea	-0.00923	0.002096	0.0000106	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02858510	chr14:51818419	14	51818419	-	Open sea	-0.010172	0.002309	0.0000106	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21622152	chr16:2961642	16	2961642	FLYWCH1	Island	0.003996	0.000907	0.0000106	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12639574	chr1:179200312	1	179200312	ABL2	South shore	-0.016861	0.00383	0.0000107	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23207985	chr11:67034251	11	67034251	ADRBK1	Island	0.00678	0.00154	0.0000107	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10470524	chr15:49462287	15	49462287	GALK2	Open sea	0.004959	0.001126	0.0000107	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07816095	chr16:88501727	16	88501727	ZNF469	North shore	-0.009865	0.002241	0.0000107	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23598089	chr1:203652079	1	203652079	ATP2B4	Open sea	0.016921	0.003845	0.0000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14814323	chr11:6412852	11	6412852	SMPD1	South shore	-0.009996	0.002272	0.0000108	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05146536	chr4:77140678	4	77140678	-	Open sea	0.011394	0.00259	0.0000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24180759	chr5:167551234	5	167551234	ODZ2	Open sea	0.012572	0.002858	0.0000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20488123	chr6:20689061	6	20689061	CDKAL1	Open sea	0.015875	0.003609	0.0000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21233377	chr9:116151931	9	116151931	ALAD	Open sea	-0.008443	0.00192	0.0000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04200323	chr11:45907069	11	45907069	MAPK8IP1	Island	0.005924	0.001347	0.0000109	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21378920	chr3:101392186	3	101392186	ZBTB11	North shelf	-0.021829	0.004965	0.000011	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11700800	chr5:92906633	5	92906633	FLJ42709	Island	0.009175	0.002087	0.000011	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04124916	chr14:21755820	14	21755820	RPGRIP1	Open sea	-0.012322	0.002805	0.0000112	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22175247	chr2:32264954	2	32264954	DPY30	Island	0.005963	0.001358	0.0000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01704534	chr4:40518024	4	40518024	RBM47	Open sea	0.014409	0.003282	0.0000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21845400	chr4:160098011	4	160098011	-	Open sea	-0.027318	0.006222	0.0000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01904296	chr11:45713046	11	45713046	-	Open sea	0.012064	0.002748	0.0000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23320499	chr12:12659177	12	12659177	DUSP16	Open sea	0.013603	0.003098	0.0000113	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10964627	chr3:65985404	3	65985404	MAGI1	Open sea	0.01283	0.002923	0.0000114	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13057055	chr17:36572011	17	36572011	-	North shelf	0.006566	0.001496	0.0000114	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14333176	chr5:114879687	5	114879687	FEM1C	North shore	0.006231	0.00142	0.0000115	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14032070	chr9:115098991	9	115098991	-	South shelf	-0.020065	0.004574	0.0000115	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02771362	chr9:130541859	9	130541859	SH2D3C	Open sea	0.012282	0.002802	0.0000117	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09616795	chr11:31531290	11	31531290	ELP4;IMMP1L	Island	0.00491	0.00112	0.0000117	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25095900	chr12:92317036	12	92317036	-	Open sea	-0.008637	0.00197	0.0000117	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16734795	chr19:47839187	19	47839187	GPR77	Open sea	0.017158	0.003915	0.0000117	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10944833	chr6:17702460	6	17702460	NUP153	North shelf	0.011987	0.002736	0.0000118	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03732014	chr21:30676184	21	30676184	BACH1	Open sea	0.015013	0.003427	0.0000118	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07624918	chr3:136533970	3	136533970	-	North shelf	0.016195	0.0037	0.000012	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27630180	chr6:163135177	6	163135177	PARK2	Open sea	-0.013549	0.003095	0.000012	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08423149	chr7:5013451	7	5013451	RNF216L	North shore	0.011165	0.002551	0.000012	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09131339	chr1:109914235	1	109914235	SORT1	Open sea	0.012934	0.002956	0.0000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03999653	chr2:135810355	2	135810355	RAB3GAP1	Open sea	0.005173	0.001182	0.0000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12845923	chr4:55139873	4	55139873	PDGFRA	Open sea	0.013507	0.003087	0.0000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06752267	chr5:177799205	5	177799205	COL23A1	Open sea	-0.014369	0.003284	0.0000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04813697	chr10:22920025	10	22920025	PIP4K2A	Open sea	0.021997	0.005027	0.0000121	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19787891	chr5:147691248	5	147691248	SPINK7	Open sea	0.016495	0.003771	0.0000122	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07715909	chr11:1750738	11	1750738	HCCA2	Open sea	0.009916	0.002268	0.0000123	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25495311	chr6:116454307	6	116454307	NT5DC1	Open sea	-0.016506	0.003777	0.0000124	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01708236	chr6:44233446	6	44233446	NFKBIE	Island	0.010828	0.002479	0.0000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21376109	chr6:144033157	6	144033157	PHACTR2	Open sea	-0.014735	0.003373	0.0000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23895846	chr14:77938718	14	77938718	-	North shelf	-0.009029	0.002067	0.0000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18781099	chr17:37911186	17	37911186	-	Island	0.003787	0.000867	0.0000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06579354	chr19:41618922	19	41618922	CYP2F1	Open sea	0.017194	0.003936	0.0000125	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24739457	chr1:205821442	1	205821442	-	South shelf	-0.016384	0.003752	0.0000126	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23902550	chr8:144681106	8	144681106	EEF1D;TIGD5	Island	-0.011249	0.002576	0.0000126	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18780243	chr13:32487268	13	32487268	EEF1DP3	Open sea	-0.023055	0.005279	0.0000126	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23107301	chr10:78906841	10	78906841	KCNMA1	Open sea	0.019836	0.004544	0.0000127	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09495491	chr11:33706373	11	33706373	-	Open sea	-0.02557	0.005858	0.0000127	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04467350	chr22:19434622	22	19434622	C22orf39	North shore	0.006927	0.001587	0.0000127	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01413314	chr3:50330115	3	50330115	IFRD2	Island	0.003279	0.000751	0.0000128	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06726374	chr6:128841053	6	128841053	PTPRK	Island	0.005786	0.001326	0.0000128	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04615850	chr19:5048814	19	5048814	KDM4B	Island	-0.0096	0.0022	0.0000128	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16961536	chr4:122700296	4	122700296	-	Open sea	-0.011856	0.002718	0.0000129	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00239657	chr5:2703942	5	2703942	-	Open sea	0.020662	0.004737	0.0000129	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00420347	chr1:65362428	1	65362428	JAK1	Open sea	-0.008554	0.001962	0.000013	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13310541	chr4:48018631	4	48018631	NIPAL1	Island	0.005171	0.001186	0.000013	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10372476	chr1:236849473	1	236849473	ACTN2	Island	-0.023606	0.005416	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14870461	chr3:69062103	3	69062103	C3orf64	North shore	0.016651	0.00382	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02116889	chr5:130971738	5	130971738	RAPGEF6	South shore	0.004753	0.00109	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04552799	chr8:100246786	8	100246786	VPS13B	Open sea	-0.00843	0.001934	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15937191	chr10:90423628	10	90423628	LIPF	Open sea	-0.018827	0.00432	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27428414	chr10:99343942	10	99343942	DHDPSL	Open sea	0.014992	0.00344	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20206377	chr11:2323272	11	2323272	TSPAN32;C11orf21	Open sea	0.007873	0.001806	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16639691	chr13:28597227	13	28597227	FLT3	Open sea	0.01699	0.003898	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00359868	chr21:40752339	21	40752339	WRB	Island	0.004872	0.001118	0.0000131	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24469412	chr2:133430523	2	133430523	LYPD1;NCKAP5	South shore	-0.019211	0.004413	0.0000134	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02047359	chr10:75174015	10	75174015	ANXA7	South shore	0.004851	0.001114	0.0000134	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03435979	chr2:10141690	2	10141690	GRHL1	Open sea	-0.022132	0.005086	0.0000135	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19411699	chr2:225792082	2	225792082	DOCK10	Open sea	0.012544	0.002882	0.0000135	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07516712	chr7:107798547	7	107798547	NRCAM	Open sea	-0.012949	0.002975	0.0000135	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02979010	chr12:72319077	12	72319077	TBC1D15	Open sea	-0.02504	0.00575	0.0000135	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26624118	chr11:57283450	11	57283450	SLC43A1	South shore	0.005657	0.001301	0.0000137	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08934286	chr12:123463762	12	123463762	ARL6IP4;OGFOD2	North shore	-0.01017	0.002339	0.0000137	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06129084	chr16:58034153	16	58034153	C16orf57;ZNF319	Island	0.006115	0.001407	0.0000138	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00224929	chr2:171705463	2	171705463	GAD1	Open sea	-0.00868	0.001997	0.0000139	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21368063	chr2:27338538	2	27338538	CGREF1	North shelf	0.013627	0.003136	0.0000139	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23051559	chr11:119015827	11	119015827	-	North shelf	0.012738	0.002931	0.0000139	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18970250	chr4:169142962	4	169142962	DDX60	Open sea	-0.013735	0.003162	0.000014	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10079318	chr10:104154150	10	104154150	NFKB2	Island	0.00512	0.001179	0.000014	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03598112	chr17:28691021	17	28691021	-	Open sea	0.01281	0.002949	0.000014	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15597855	chr1:117753602	1	117753602	VTCN1	Open sea	-0.008595	0.001979	0.0000141	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27521109	chr1:41892144	1	41892144	-	South shelf	0.012068	0.002779	0.0000141	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14714629	chr7:99495452	7	99495452	TRIM4	Open sea	0.011587	0.002668	0.0000141	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18354203	chr11:27696004	11	27696004	BDNF;BDNFOS	Open sea	-0.019066	0.004391	0.0000141	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09324359	chr17:79019466	17	79019466	BAIAP2	Open sea	-0.00895	0.002061	0.0000141	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10592563	chr2:178974175	2	178974175	PDE11A	North shelf	-0.015073	0.003474	0.0000143	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20861250	chr15:67701662	15	67701662	IQCH	Open sea	-0.021519	0.004961	0.0000144	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14860494	chr1:94374966	1	94374966	GCLM	Island	0.006006	0.001385	0.0000145	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00008800	chr2:38710171	2	38710171	-	Open sea	-0.017416	0.004016	0.0000145	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14549249	chr7:3083541	7	3083541	CARD11	Open sea	0.009442	0.002177	0.0000145	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09661809	chr11:74953082	11	74953082	-	Island	0.009395	0.002167	0.0000145	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10628098	chr11:65292300	11	65292300	SCYL1	North shore	0.00663	0.00153	0.0000146	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17813874	chr2:625803	2	625803	-	North shelf	0.016143	0.003726	0.0000147	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04408488	chr13:28494116	13	28494116	PDX1	Island	0.008309	0.001918	0.0000147	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17640485	chr3:195620147	3	195620147	TNK2	North shelf	-0.014892	0.003438	0.0000148	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22062554	chr19:55866677	19	55866677	FAM71E2;COX6B2	South shore	0.006618	0.001528	0.0000148	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12919297	chr5:34923288	5	34923288	BRIX1	Open sea	-0.011458	0.002646	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13691744	chr6:31842575	6	31842575	SLC44A4	Open sea	0.0131	0.003025	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20394376	chr6:156711764	6	156711764	-	Open sea	-0.011348	0.002621	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05180258	chr14:73921198	14	73921198	NUMB	North shelf	-0.026557	0.006133	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27313007	chr17:78617750	17	78617750	RPTOR	Open sea	-0.012047	0.002782	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04335562	chr19:2945000	19	2945000	ZNF77	Island	0.00742	0.001714	0.0000149	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25008156	chr6:170893875	6	170893875	PDCD2	Island	0.006971	0.001611	0.000015	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07943849	chr7:151201868	7	151201868	RHEB	Open sea	-0.025101	0.005799	0.000015	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25276126	chr1:20005715	1	20005715	HTR6	Island	-0.011709	0.002706	0.0000151	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03198066	chr2:159311068	2	159311068	CCDC148	North shelf	0.008959	0.00207	0.0000151	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07617163	chr11:71185649	11	71185649	NADSYN1	Open sea	-0.008688	0.002008	0.0000151	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07430085	chr14:23518387	14	23518387	CDH24	South shore	-0.008448	0.001952	0.0000151	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14305943	chr10:120820318	10	120820318	SNORA19;EIF3A	Open sea	-0.020872	0.004825	0.0000152	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25733915	chr17:40829168	17	40829168	PLEKHH3	South shore	0.004107	0.00095	0.0000152	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10122434	chr1:209963087	1	209963087	IRF6	Open sea	0.014404	0.003331	0.0000153	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19616339	chr2:69164114	2	69164114	-	Open sea	0.016671	0.003855	0.0000153	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05529036	chr12:56580425	12	56580425	SMARCC2	North shelf	-0.019678	0.00455	0.0000153	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05334655	chr14:23890294	14	23890294	MYH7	South shore	0.01107	0.00256	0.0000153	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01876531	chr1:208405868	1	208405868	PLXNA2	Open sea	0.016078	0.003721	0.0000155	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24724503	chr1:40627611	1	40627611	RLF	Island	0.004784	0.001107	0.0000156	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08699575	chr8:333325	8	333325	-	Open sea	-0.021643	0.00501	0.0000156	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23321951	chr19:2808070	19	2808070	THOP1	Island	-0.010318	0.002388	0.0000156	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06044463	chr2:238601261	2	238601261	LRRFIP1	Island	0.005279	0.001222	0.0000157	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22182975	chr6:167571172	6	167571172	GPR31	Open sea	-0.0111	0.00257	0.0000157	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08497894	chr10:115924177	10	115924177	C10orf118	Open sea	-0.027201	0.006299	0.0000157	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00904966	chr16:1122937	16	1122937	LOC146336	Island	-0.019898	0.004609	0.0000158	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00024404	chr5:79552470	5	79552470	SERINC5	South shore	0.012742	0.002952	0.0000159	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09246347	chr6:32164061	6	32164061	GPSM3;NOTCH4	Island	0.004378	0.001014	0.0000159	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04260891	chr7:75514575	7	75514575	RHBDD2	Open sea	-0.007819	0.001812	0.0000159	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26385283	chr18:61616718	18	61616718	HMSD	Open sea	0.015376	0.003563	0.0000159	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23475018	chr3:124277638	3	124277638	KALRN	Open sea	0.014451	0.003352	0.0000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16322014	chr11:6518559	11	6518559	DNHD1	Open sea	-0.009382	0.002176	0.0000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03905247	chr12:124880022	12	124880022	NCOR2	Open sea	-0.009279	0.002152	0.0000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05009047	chr16:4659466	16	4659466	FAM100A	Island	-0.01012	0.002347	0.0000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00218893	chr17:73073239	17	73073239	-	North shore	0.015306	0.00355	0.0000162	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11658909	chr1:155510764	1	155510764	ASH1L	Open sea	0.012981	0.003012	0.0000163	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07144666	chr7:6501749	7	6501749	KDELR2	Open sea	-0.010564	0.002451	0.0000163	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01067604	chr1:7831845	1	7831845	VAMP3	Island	0.007298	0.001694	0.0000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03960220	chr2:20428129	2	20428129	-	South shelf	-0.012422	0.002883	0.0000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09892459	chr5:58384884	5	58384884	PDE4D	Open sea	-0.017209	0.003994	0.0000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07938459	chr12:7055586	12	7055586	PTPN6	South shore	0.007653	0.001776	0.0000164	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27365426	chr2:143886372	2	143886372	ARHGAP15	Open sea	0.007516	0.001745	0.0000166	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27065742	chr4:84180701	4	84180701	-	Open sea	-0.019838	0.004607	0.0000166	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08686259	chr7:106305084	7	106305084	-	South shelf	-0.015008	0.003485	0.0000166	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01569860	chr1:8383171	1	8383171	SLC45A1	North shore	-0.013595	0.003158	0.0000167	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05641843	chr17:7477972	17	7477972	EIF4A1;SNORA48	South shore	0.013825	0.003211	0.0000167	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13681800	chr6:168498470	6	168498470	-	North shelf	-0.012183	0.002831	0.0000168	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20155875	chr17:66452567	17	66452567	WIPI1	North shore	0.017234	0.004004	0.0000168	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22020752	chr12:22697546	12	22697546	KIAA0528	Island	0.005393	0.001254	0.0000169	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19191624	chr2:32582276	2	32582276	BIRC6	Island	0.006416	0.001492	0.000017	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23749856	chr3:142839837	3	142839837	CHST2	Island	0.005397	0.001255	0.000017	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17515456	chr6:30312866	6	30312866	RPP21	Island	0.008997	0.002092	0.000017	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07018260	chr11:10536864	11	10536864	RNF141	Open sea	-0.012753	0.002966	0.0000171	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23582644	chr18:61557687	18	61557687	SERPINB2	Open sea	0.016252	0.00378	0.0000171	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06434353	chr5:114951632	5	114951632	TMED7-TICAM2;TMED7	Open sea	-0.023739	0.005523	0.0000172	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04844323	chr16:2144899	16	2144899	PKD1	South shelf	-0.011433	0.00266	0.0000172	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22974212	chr6:31744040	6	31744040	C6orf27	Open sea	-0.009254	0.002153	0.0000173	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23432673	chr10:75549286	10	75549286	KIAA0913	South shelf	-0.009824	0.002286	0.0000173	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12347444	chr20:360547	20	360547	TRIB3	North shore	-0.007613	0.001772	0.0000174	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21460686	chr6:169106914	6	169106914	-	Open sea	-0.007383	0.00172	0.0000176	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06952291	chr19:17414123	19	17414123	ABHD8	Island	0.00542	0.001263	0.0000177	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09364245	chr19:56047543	19	56047543	SBK2	Island	-0.009313	0.002171	0.0000179	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15893895	chr7:51104413	7	51104413	COBL	Open sea	-0.009979	0.002327	0.000018	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12270129	chr12:121734046	12	121734046	CAMKK2	Island	0.006479	0.001511	0.000018	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26619570	chr12:80308778	12	80308778	PPP1R12A	Open sea	-0.019052	0.004443	0.000018	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13971574	chr2:39102874	2	39102874	MORN2;DHX57	Island	0.004653	0.001085	0.0000181	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17187439	chr2:205199965	2	205199965	-	Open sea	-0.017039	0.003975	0.0000181	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10557578	chr8:37758453	8	37758453	RAB11FIP1	South shore	0.009586	0.002236	0.0000181	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12082352	chr10:76572932	10	76572932	-	North shore	-0.007054	0.001645	0.0000181	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03451959	chr3:93646432	3	93646432	PROS1	Open sea	-0.02176	0.005077	0.0000182	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04906603	chr2:73048869	2	73048869	EXOC6B	North shelf	-0.018894	0.00441	0.0000183	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00321996	chr3:177696327	3	177696327	-	Open sea	-0.020266	0.00473	0.0000183	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17028218	chr11:67261122	11	67261122	PITPNM1	Island	-0.012745	0.002975	0.0000183	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07664027	chr19:49990137	19	49990137	RPL13AP5;RPL13A	North shore	-0.009826	0.002293	0.0000183	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11550064	chr2:240148191	2	240148191	HDAC4	Open sea	0.014064	0.003283	0.0000184	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26276470	chr3:121612039	3	121612039	SLC15A2	Open sea	-0.009985	0.002331	0.0000184	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20585916	chr4:186081460	4	186081460	KIAA1430	Open sea	-0.019127	0.004465	0.0000184	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16030538	chr7:44240728	7	44240728	YKT6	Island	0.005572	0.001301	0.0000185	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05076730	chr8:129060815	8	129060815	MIR1207;PVT1	Open sea	0.017044	0.00398	0.0000185	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26800525	chr13:113411519	13	113411519	ATP11A	South shore	-0.018591	0.004341	0.0000185	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16758800	chr7:96631902	7	96631902	DLX6AS	South shore	0.012078	0.002821	0.0000186	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26695157	chr12:109985283	12	109985283	-	Open sea	-0.025757	0.006016	0.0000186	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01744217	chr20:54933713	20	54933713	C20orf108	North shore	0.01054	0.002462	0.0000186	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19051213	chr2:128281334	2	128281334	IWS1	North shelf	0.015039	0.003514	0.0000187	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04465154	chr8:9045558	8	9045558	-	Open sea	0.021081	0.004926	0.0000187	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02108135	chr17:42017758	17	42017758	-	South shore	0.012892	0.003012	0.0000187	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21484863	chr6:21131734	6	21131734	CDKAL1	Open sea	-0.024542	0.005736	0.0000188	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00996925	chr1:172171825	1	172171825	DNM3	Open sea	-0.023947	0.005598	0.0000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06704631	chr4:2307998	4	2307998	ZFYVE28	South shore	-0.011606	0.002713	0.0000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13820205	chr9:132448040	9	132448040	PRRX2	Open sea	0.013174	0.00308	0.0000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07172007	chr12:26133416	12	26133416	RASSF8	Open sea	-0.025888	0.006052	0.0000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00275828	chr17:39222690	17	39222690	KRTAP2-4	Open sea	0.015837	0.003702	0.0000189	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07653647	chr2:219741529	2	219741529	-	North shelf	0.007711	0.001803	0.000019	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11161417	chr17:31319454	17	31319454	SPACA3	Open sea	0.015196	0.003554	0.000019	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22827290	chr16:30960753	16	30960753	ORAI3	Island	0.00687	0.001607	0.0000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03778707	chr17:18167175	17	18167175	SMCR7	Island	-0.008998	0.002105	0.0000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	ch.20.209864F	chr20:9344219	20	9344219	PLCB4	Open sea	0.010732	0.00251	0.0000191	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19548313	chr19:1065712	19	1065712	HMHA1	North shore	-0.013378	0.003131	0.0000193	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04892443	chr1:191503762	1	191503762	-	Open sea	-0.022502	0.005269	0.0000195	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23515420	chr7:27173776	7	27173776	-	South shelf	-0.021548	0.005046	0.0000195	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18522102	chr13:60970987	13	60970987	TDRD3	Island	0.004849	0.001135	0.0000195	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07018577	chr1:180831396	1	180831396	XPR1	Open sea	-0.011822	0.002769	0.0000196	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07835482	chr2:182656091	2	182656091	-	Open sea	0.019369	0.004537	0.0000196	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22179055	chr4:41207235	4	41207235	APBB2	Open sea	0.012225	0.002863	0.0000196	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25098281	chr12:6484713	12	6484713	SCNN1A	Open sea	-0.010365	0.002428	0.0000196	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16297993	chr3:183484947	3	183484947	YEATS2	Open sea	0.010356	0.002426	0.0000197	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05732436	chr2:68290174	2	68290174	C1D	Open sea	0.004519	0.001059	0.0000198	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21147203	chr5:134529659	5	134529659	-	South shelf	0.018031	0.004226	0.0000198	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22453791	chr5:77772321	5	77772321	SCAMP1	Open sea	-0.019953	0.004676	0.0000198	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09122799	chr16:2582813	16	2582813	CEMP1	South shore	0.003372	0.00079	0.0000198	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04163967	chr21:39870627	21	39870627	ERG	Open sea	0.009111	0.002135	0.0000198	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05307752	chr2:144462886	2	144462886	ARHGAP15	Open sea	0.018553	0.004349	0.0000199	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14836555	chr14:24743391	14	24743391	-	South shelf	0.016179	0.003793	0.0000199	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27165324	chr16:30090804	16	30090804	PPP4C	South shelf	-0.00779	0.001826	0.0000199	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03669357	chr3:71912936	3	71912936	-	Open sea	0.012392	0.002906	0.00002	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02461502	chr16:88941821	16	88941821	CBFA2T3	North shore	-0.011694	0.002743	0.0000201	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19430423	chr19:41702153	19	41702153	CYP2S1	South shelf	0.010317	0.00242	0.0000201	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24152264	chr1:232820610	1	232820610	-	Open sea	0.0112	0.002627	0.0000202	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10519680	chr8:37707506	8	37707506	BRF2	Island	0.007914	0.001857	0.0000202	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27649094	chr8:124215374	8	124215374	FAM83A;LOC100131726	Open sea	0.015567	0.003652	0.0000202	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13712518	chr9:140001096	9	140001096	MAN1B1	South shelf	-0.010311	0.002419	0.0000202	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04028070	chr10:12391599	10	12391599	CAMK1D	Island	0.007125	0.001671	0.0000202	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06995966	chr5:137204467	5	137204467	MYOT	Open sea	-0.024982	0.005862	0.0000203	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14118424	chr5:110445104	5	110445104	WDR36	Open sea	-0.02159	0.005066	0.0000203	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11933232	chr12:123451206	12	123451206	ABCB9	Island	0.008979	0.002107	0.0000203	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14583550	chr9:98071630	9	98071630	FANCC	North shelf	-0.024483	0.005748	0.0000205	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10171125	chr8:27850315	8	27850315	SCARA5	Open sea	0.010164	0.002387	0.0000206	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20408290	chr12:68042072	12	68042072	DYRK2	North shore	0.007086	0.001664	0.0000206	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24758957	chr5:145746294	5	145746294	-	Open sea	-0.024951	0.005861	0.0000207	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04128483	chr21:38446099	21	38446099	PIGP;TTC3	Island	0.007077	0.001662	0.0000207	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23155293	chr5:57112737	5	57112737	-	Open sea	-0.020649	0.004852	0.0000208	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06646548	chr10:77152949	10	77152949	-	North shelf	0.009739	0.002288	0.0000208	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07483245	chr15:23034598	15	23034598	NIPA2	Island	0.004482	0.001053	0.0000208	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22531018	chr7:142981779	7	142981779	TMEM139	North shelf	-0.009443	0.002219	0.0000209	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20321756	chr11:111848400	11	111848400	DIXDC1	Island	0.009085	0.002135	0.0000209	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18842157	chr14:68825875	14	68825875	RAD51L1	Open sea	0.022426	0.00527	0.0000209	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22117819	chr22:19556601	22	19556601	-	South shelf	0.012647	0.002972	0.0000209	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13320436	chr8:55138014	8	55138014	-	Open sea	0.015672	0.003684	0.000021	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12978232	chr12:89339873	12	89339873	-	Open sea	0.013542	0.003183	0.000021	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22777249	chr22:50319194	22	50319194	CRELD2	North shelf	0.019327	0.004543	0.000021	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08480307	chr1:100547766	1	100547766	HIAT1	Open sea	-0.025305	0.00595	0.0000211	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00592063	chr2:71295358	2	71295358	NAGK	Island	0.004239	0.000997	0.0000211	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09091148	chr8:142445768	8	142445768	FLJ43860	Open sea	-0.009439	0.002219	0.0000211	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12600749	chr7:157648749	7	157648749	PTPRN2	South shore	0.022441	0.005278	0.0000212	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09696465	chr17:70934769	17	70934769	SLC39A11	Open sea	-0.021319	0.005014	0.0000212	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26393983	chr18:2571747	18	2571747	NDC80;METTL4	South shore	0.005489	0.001291	0.0000212	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01006102	chr3:195590998	3	195590998	TNK2	North shelf	-0.010452	0.002459	0.0000213	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15521745	chr1:184133404	1	184133404	-	Open sea	0.014108	0.00332	0.0000214	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23610447	chr6:113650073	6	113650073	-	Open sea	-0.018634	0.004386	0.0000215	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17166812	chr1:161169574	1	161169574	NDUFS2;ADAMTS4	North shelf	0.011593	0.002729	0.0000216	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23183469	chr4:1686288	4	1686288	FAM53A	Island	0.005569	0.001311	0.0000216	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02598564	chr10:72822634	10	72822634	-	Open sea	0.013339	0.00314	0.0000216	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03873608	chr15:51914168	15	51914168	DMXL2	Island	0.007279	0.001714	0.0000216	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00331343	chr3:136581031	3	136581031	NCK1	Island	0.007584	0.001786	0.0000217	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20603106	chr4:86699705	4	86699705	ARHGAP24	Open sea	-0.02043	0.004812	0.0000218	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21953428	chr20:56968556	20	56968556	VAPB	South shelf	-0.008931	0.002104	0.0000218	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25105652	chr5:39413038	5	39413038	DAB2	Open sea	0.013349	0.003145	0.0000219	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24143221	chr6:31780526	6	31780526	HSPA1L	North shelf	0.012748	0.003004	0.000022	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10016208	chr19:19143972	19	19143972	SFRS14;ARMC6	Island	0.00611	0.00144	0.000022	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14151440	chr1:90478723	1	90478723	ZNF326	Open sea	-0.00801	0.001888	0.0000221	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12302912	chr3:12704256	3	12704256	RAF1	North shore	0.00503	0.001186	0.0000221	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13600002	chr11:11102839	11	11102839	-	Open sea	-0.012495	0.002945	0.0000221	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03863464	chr22:31688391	22	31688391	PIK3IP1	South shore	0.005301	0.001249	0.0000221	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08266106	chr1:114430903	1	114430903	BCL2L15	Open sea	-0.009949	0.002346	0.0000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23097033	chr2:95831158	2	95831158	ZNF2	Island	0.004418	0.001042	0.0000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09387914	chr6:53187374	6	53187374	ELOVL5	Open sea	0.01317	0.003105	0.0000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01003666	chr7:139929429	7	139929429	-	North shore	0.016057	0.003786	0.0000222	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14592365	chr11:111288100	11	111288100	-	Open sea	0.016932	0.003994	0.0000224	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12032655	chr19:43856746	19	43856746	CD177	Open sea	0.024195	0.005707	0.0000224	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26690672	chr4:146031291	4	146031291	ABCE1	Open sea	-0.021596	0.005095	0.0000225	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06700060	chr12:65859647	12	65859647	MSRB3	Open sea	0.012305	0.002903	0.0000225	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03297042	chr22:29468762	22	29468762	KREMEN1	Island	0.004026	0.00095	0.0000225	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24569045	chr5:39073701	5	39073701	RICTOR	North shore	0.004598	0.001085	0.0000226	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14756265	chr12:109199119	12	109199119	SSH1	Open sea	-0.017196	0.004058	0.0000226	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00485707	chr15:89198782	15	89198782	ISG20	Open sea	-0.007378	0.001741	0.0000226	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17592292	chr4:967094	4	967094	DGKQ	Island	0.006943	0.001639	0.0000228	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07367602	chr7:115963592	7	115963592	-	Open sea	-0.016299	0.003848	0.0000228	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01763913	chr12:57623930	12	57623930	SHMT2	South shore	0.004695	0.001108	0.0000228	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17411681	chr2:152685166	2	152685166	ARL5A	South shore	0.003924	0.000927	0.0000229	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22116041	chr4:153564653	4	153564653	TMEM154	Open sea	0.012067	0.00285	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27362222	chr4:124317901	4	124317901	SPRY1	North shore	0.009377	0.002215	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12949547	chr12:58718950	12	58718950	-	Open sea	0.012945	0.003058	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02666105	chr16:31724574	16	31724574	ZNF720	North shore	0.006084	0.001437	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07035499	chr17:2619578	17	2619578	-	South shelf	-0.007918	0.00187	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18569070	chr19:17136562	19	17136562	CPAMD8	Open sea	-0.019166	0.004527	0.000023	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11871295	chr18:47815430	18	47815430	CXXC1	South shore	-0.023435	0.005537	0.0000231	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25369553	chr1:61522373	1	61522373	-	South shelf	-0.023295	0.005505	0.0000232	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15969901	chr6:36810478	6	36810478	-	South shore	0.010649	0.002517	0.0000232	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07735969	chr16:68418473	16	68418473	SMPD3	Open sea	0.010118	0.002391	0.0000232	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08595268	chr18:6929701	18	6929701	-	Island	-0.009189	0.002172	0.0000232	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12894371	chr6:109812795	6	109812795	-	Open sea	0.017564	0.004151	0.0000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02897457	chr7:45144268	7	45144268	TBRG4;SNORA5A	Open sea	-0.008697	0.002056	0.0000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22163812	chr12:132914075	12	132914075	-	South shelf	-0.012964	0.003064	0.0000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19963178	chr13:113538045	13	113538045	ATP11A	South shore	-0.009908	0.002342	0.0000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18371284	chr16:75182568	16	75182568	ZFP1	Island	0.004357	0.00103	0.0000233	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24862861	chr10:976594	10	976594	-	North shore	0.005114	0.001209	0.0000234	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24765658	chr4:74702621	4	74702621	CXCL6	Island	0.009211	0.002178	0.0000235	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06021990	chr13:28912746	13	28912746	FLT1	Open sea	0.012017	0.002842	0.0000235	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16589545	chr13:60351803	13	60351803	DIAPH3	Open sea	-0.009483	0.002242	0.0000235	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10044209	chr14:88122084	14	88122084	-	Open sea	-0.020215	0.00478	0.0000235	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20338754	chr18:29677086	18	29677086	RNF138	South shelf	0.016193	0.003829	0.0000235	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07229301	chr1:1487445	1	1487445	SSU72	North shelf	-0.009088	0.00215	0.0000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27607283	chr5:15385796	5	15385796	-	Open sea	0.023325	0.005517	0.0000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26593228	chr10:88610737	10	88610737	BMPR1A	Open sea	-0.030148	0.007131	0.0000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26931527	chr16:83979911	16	83979911	-	Open sea	-0.009122	0.002158	0.0000236	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05860556	chr10:112331306	10	112331306	SMC3	South shelf	-0.019146	0.00453	0.0000237	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16167166	chr11:59131003	11	59131003	OR5AN1	Open sea	-0.018782	0.004444	0.0000237	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08643855	chr10:1416142	10	1416142	ADARB2	Island	-0.011444	0.002709	0.0000239	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05257202	chr13:99934873	13	99934873	UBAC2	Open sea	0.014666	0.003471	0.0000239	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00754103	chr1:165910821	1	165910821	-	Island	-0.00522	0.001236	0.000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03523740	chr1:32645027	1	32645027	TXLNA	North shore	0.011052	0.002616	0.000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27249554	chr13:37578846	13	37578846	EXOSC8	South shelf	-0.025007	0.00592	0.000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12332239	chr17:66251609	17	66251609	AMZ2	North shelf	0.014628	0.003463	0.000024	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27310251	chr5:81574067	5	81574067	RPS23	Island	0.008787	0.002082	0.0000244	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04281416	chr6:30178180	6	30178180	TRIM26	North shelf	-0.027055	0.006411	0.0000244	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08743556	chr8:125487621	8	125487621	RNF139	Island	0.004817	0.001141	0.0000244	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11337915	chr21:40719088	21	40719088	HMGN1	North shore	0.013449	0.003187	0.0000244	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13226135	chr22:40051471	22	40051471	CACNA1I	Open sea	0.016638	0.003942	0.0000244	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08044294	chr19:2213958	19	2213958	DOT1L	Island	-0.008386	0.001988	0.0000245	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11916726	chr6:90528857	6	90528857	MDN1	North shore	0.00391	0.000927	0.0000246	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22852276	chr20:35724169	20	35724169	RBL1	Island	0.004408	0.001045	0.0000246	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14605274	chr2:169750924	2	169750924	-	South shelf	0.00913	0.002165	0.0000247	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02220008	chr6:13192742	6	13192742	PHACTR1	Open sea	0.015362	0.003642	0.0000247	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25468541	chr7:5014008	7	5014008	RNF216L	Island	-0.009086	0.002154	0.0000247	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03587511	chr1:44115742	1	44115742	KDM4A	Island	0.006007	0.001424	0.0000248	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20734030	chr12:95111263	12	95111263	-	Open sea	-0.02365	0.005609	0.0000248	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04784327	chr16:56998712	16	56998712	CETP	Open sea	0.007998	0.001897	0.0000248	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16506072	chr16:85833520	16	85833520	COX4NB;COX4I1	Island	0.003768	0.000894	0.0000248	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16983759	chr18:77794750	18	77794750	C18orf22	Island	0.003786	0.000898	0.0000248	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24927841	chr8:129702875	8	129702875	-	Open sea	-0.029937	0.007101	0.0000249	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22221831	chr12:15039397	12	15039397	MGP	Open sea	-0.024607	0.005837	0.0000249	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05336188	chr19:18959506	19	18959506	UPF1	Open sea	0.010982	0.002606	0.000025	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04806150	chr13:112292610	13	112292610	-	Open sea	-0.010694	0.002538	0.0000251	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02011912	chr3:53927033	3	53927033	SELK	South shore	-0.007535	0.001789	0.0000252	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12551813	chr1:200781121	1	200781121	CAMSAP1L1	Open sea	0.012753	0.003028	0.0000253	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03035167	chr2:201336269	2	201336269	SPATS2L	Open sea	0.012344	0.002931	0.0000253	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13033858	chr12:109248326	12	109248326	SSH1	North shelf	0.017821	0.004231	0.0000253	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05303208	chr1:91178472	1	91178472	BARHL2	South shore	0.010186	0.002419	0.0000254	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04275692	chr7:45610627	7	45610627	-	North shelf	0.015025	0.003568	0.0000254	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02990439	chr17:4875527	17	4875527	CAMTA2	South shelf	-0.008872	0.002107	0.0000254	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13996617	chr19:49014708	19	49014708	LMTK3	Island	0.007973	0.001893	0.0000254	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25476565	chr5:125930017	5	125930017	ALDH7A1	North shore	-0.036008	0.008552	0.0000255	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11450001	chr12:10365596	12	10365596	GABARAPL1	Island	0.008515	0.002022	0.0000255	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08121478	chr19:47217786	19	47217786	PRKD2	North shore	0.004984	0.001184	0.0000255	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11797656	chr7:753808	7	753808	PRKAR1B	South shore	-0.010598	0.002518	0.0000256	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10055227	chr16:58768320	16	58768320	GOT2	Island	0.005704	0.001355	0.0000256	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10301588	chr11:67810742	11	67810742	TCIRG1	Open sea	-0.011688	0.002777	0.0000257	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09562980	chr12:31483299	12	31483299	-	South shelf	-0.023029	0.005472	0.0000257	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23532454	chr14:75910026	14	75910026	JDP2	Open sea	0.011372	0.002703	0.0000258	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22726026	chr1:120324270	1	120324270	-	Open sea	-0.007608	0.001809	0.0000259	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17498615	chr13:97874551	13	97874551	MBNL2	Open sea	0.003877	0.000922	0.0000259	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	ch.13.381084F	chr13:35200731	13	35200731	-	Open sea	0.013146	0.003125	0.0000259	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17454509	chr12:46308820	12	46308820	-	Open sea	-0.014421	0.003429	0.000026	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08614528	chr3:9976017	3	9976017	CRELD1	South shore	0.00706	0.001679	0.0000261	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11519725	chr7:69175743	7	69175743	AUTS2	Open sea	-0.019903	0.004733	0.0000261	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07121900	chr13:50706912	13	50706912	-	North shore	0.014053	0.003343	0.0000263	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03917884	chr4:109549223	4	109549223	RPL34	Open sea	-0.007439	0.00177	0.0000264	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19933238	chr4:113153956	4	113153956	AP1AR	South shore	-0.020876	0.004967	0.0000264	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02742555	chr11:15200692	11	15200692	INSC	Open sea	0.012578	0.002993	0.0000264	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16590991	chr7:155437209	7	155437209	RBM33	Island	0.005711	0.00136	0.0000266	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00759508	chr15:93442616	15	93442616	CHD2	Open sea	0.007993	0.001903	0.0000267	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07008962	chr6:138478542	6	138478542	-	North shelf	-0.015642	0.003725	0.0000268	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08199529	chr11:104894514	11	104894514	CASP5	Open sea	-0.012979	0.003092	0.0000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17372806	chr11:63448356	11	63448356	RTN3	North shore	0.018516	0.00441	0.0000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25492213	chr13:41500614	13	41500614	-	South shelf	-0.022566	0.005375	0.0000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06855803	chr19:10450364	19	10450364	ICAM3	Open sea	0.004934	0.001175	0.0000269	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12391232	chr1:155247117	1	155247117	HCN3	Island	0.004922	0.001173	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13629388	chr6:170687780	6	170687780	FAM120B	South shore	0.011734	0.002795	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21901307	chr11:14665019	11	14665019	PDE3B;PSMA1	North shore	0.010935	0.002605	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21253130	chr13:32609104	13	32609104	FRY	South shelf	0.013008	0.003099	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01698567	chr14:36942999	14	36942999	SFTA3	Open sea	-0.020772	0.004949	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07145398	chr17:61523374	17	61523374	CYB561	Island	0.00686	0.001634	0.000027	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22113065	chr5:74672346	5	74672346	COL4A3BP	Open sea	-0.009448	0.002251	0.0000271	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10674476	chr2:97498336	2	97498336	CNNM3	Open sea	-0.006625	0.001579	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13955423	chr2:133037153	2	133037153	-	Open sea	0.01679	0.004002	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13067649	chr3:130300740	3	130300740	COL6A6	Open sea	0.012542	0.002989	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03067707	chr7:8091896	7	8091896	GLCCI1	Open sea	-0.02621	0.006247	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12264626	chr8:86350381	8	86350381	CA3	North shore	0.015346	0.003658	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19818308	chr14:75946745	14	75946745	-	Open sea	0.016199	0.003861	0.0000272	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02890642	chr1:184017798	1	184017798	-	North shelf	-0.020075	0.004786	0.0000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05765254	chr1:152132853	1	152132853	RPTN	Open sea	-0.021804	0.005198	0.0000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20822884	chr1:49240625	1	49240625	BEND5;AGBL4	North shore	0.014283	0.003405	0.0000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07092111	chr10:32621403	10	32621403	EPC1	Open sea	0.013836	0.003298	0.0000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14338062	chr12:57883279	12	57883279	MARS	South shore	-0.008304	0.00198	0.0000273	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09455096	chr2:61765470	2	61765470	XPO1	Island	0.003655	0.000871	0.0000274	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03276422	chr17:80655668	17	80655668	RAB40B	Island	0.00922	0.002198	0.0000274	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13720278	chr3:180702012	3	180702012	DNAJC19	Open sea	-0.010258	0.002446	0.0000275	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20993361	chr7:116503444	7	116503444	CAPZA2	South shore	0.01019	0.002431	0.0000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06141025	chr12:21757466	12	21757466	GYS2	Open sea	0.01372	0.003273	0.0000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26032021	chr14:54804413	14	54804413	-	Open sea	-0.026117	0.00623	0.0000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26829395	chr15:40217855	15	40217855	-	Open sea	0.015206	0.003627	0.0000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08485527	chr17:75132777	17	75132777	-	North shelf	-0.014684	0.003503	0.0000276	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03252499	chr11:124324477	11	124324477	-	Open sea	0.025019	0.00597	0.0000278	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04893454	chr7:90317963	7	90317963	-	Open sea	-0.024149	0.005764	0.0000279	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27453922	chr7:148922355	7	148922355	ZNF282	North shore	-0.004884	0.001166	0.0000279	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04633922	chr10:2699291	10	2699291	-	Open sea	-0.010403	0.002483	0.0000279	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08445226	chr3:99536904	3	99536904	C3orf26;MIR548G	Island	0.006307	0.001506	0.000028	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13925975	chr5:140502124	5	140502124	PCDHB4	North shore	0.027055	0.006458	0.000028	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09146903	chr7:94023869	7	94023869	COL1A2	Open sea	0.006886	0.001644	0.0000281	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15832577	chr1:197874077	1	197874077	C1orf53	South shore	-0.023223	0.005546	0.0000282	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00935993	chr2:21022933	2	21022933	C2orf43	Island	0.005179	0.001237	0.0000282	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09637885	chr5:55032952	5	55032952	DDX4	North shore	0.013066	0.00312	0.0000282	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19980369	chr5:121506564	5	121506564	-	Open sea	-0.02376	0.005675	0.0000283	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00817377	chr7:73441057	7	73441057	ELN	Open sea	0.014433	0.003447	0.0000283	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18870413	chr10:121411168	10	121411168	BAG3	Island	0.004675	0.001117	0.0000283	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27279652	chr12:26986506	12	26986506	ITPR2	South shore	0.005885	0.001406	0.0000283	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22192122	chr13:112735325	13	112735325	-	Open sea	-0.010602	0.002532	0.0000283	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07978494	chr7:158059179	7	158059179	PTPRN2	North shore	-0.025308	0.006046	0.0000284	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07490124	chr8:131368922	8	131368922	ASAP1	North shore	-0.023665	0.005654	0.0000284	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19325331	chr12:132849424	12	132849424	GALNT9	South shore	-0.006164	0.001473	0.0000284	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11594131	chr2:61765360	2	61765360	XPO1	North shore	0.005729	0.001369	0.0000285	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17501792	chr1:155826844	1	155826844	GON4L	North shelf	0.013674	0.003268	0.0000286	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26883190	chr1:53914086	1	53914086	-	Open sea	-0.011916	0.002848	0.0000286	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12744722	chr12:111473809	12	111473809	CUX2	North shore	0.009471	0.002264	0.0000286	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16160493	chr14:89837519	14	89837519	FOXN3	Open sea	-0.012264	0.002931	0.0000287	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05333968	chr4:187630021	4	187630021	FAT1	Open sea	-0.009057	0.002165	0.0000288	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05650999	chr5:148883763	5	148883763	CSNK1A1	Open sea	-0.012955	0.003097	0.0000288	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22446998	chr5:155701819	5	155701819	-	Open sea	0.015162	0.003625	0.0000288	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17666418	chr6:106612002	6	106612002	-	Open sea	0.015645	0.003741	0.0000289	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12446543	chr7:72897269	7	72897269	BAZ1B	Open sea	-0.008232	0.001969	0.0000289	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07663278	chr12:51663310	12	51663310	SMAGP	North shore	0.015742	0.003765	0.000029	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12763971	chr19:2235736	19	2235736	PLEKHJ1;SF3A2	Island	0.005751	0.001375	0.000029	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09593743	chr3:179041404	3	179041404	ZNF639	Island	0.004767	0.00114	0.0000291	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00550529	chr12:103979670	12	103979670	STAB2	Open sea	-0.009761	0.002335	0.0000292	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03698980	chr4:153457736	4	153457736	-	Island	0.004418	0.001057	0.0000293	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15232450	chr3:4345438	3	4345438	SETMAR	South shore	0.005244	0.001255	0.0000294	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10672880	chr8:145584004	8	145584004	GPR172A	South shore	-0.009785	0.002342	0.0000294	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03850986	chr10:116408382	10	116408382	ABLIM1	Open sea	0.020709	0.004957	0.0000294	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13525458	chr20:44486289	20	44486289	ZSWIM3;ACOT8	Open sea	0.006383	0.001528	0.0000294	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23738708	chr1:206240661	1	206240661	C1orf186	Open sea	0.01573	0.003766	0.0000296	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03341377	chr3:39309355	3	39309355	CX3CR1	Open sea	0.017129	0.004101	0.0000296	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15227911	chr17:7792059	17	7792059	CHD3	South shelf	0.013403	0.003209	0.0000296	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02995853	chr5:139944272	5	139944272	APBB3;SLC35A4	Island	0.005357	0.001283	0.0000297	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20779314	chr1:147067924	1	147067924	BCL9	North shelf	-0.022723	0.005445	0.00003	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12292268	chr6:56982370	6	56982370	ZNF451	Open sea	-0.008543	0.002047	0.0000301	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13848990	chr11:55682457	11	55682457	OR5W2	Open sea	-0.016056	0.003848	0.0000302	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24689420	chr5:179126339	5	179126339	CANX	Island	0.006107	0.001464	0.0000304	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18949794	chr7:130123340	7	130123340	-	North shelf	0.017321	0.004154	0.0000305	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21740055	chr8:668667	8	668667	ERICH1	South shelf	-0.009557	0.002292	0.0000305	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16651895	chr16:77910291	16	77910291	VAT1L	Open sea	0.015936	0.003822	0.0000305	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25320169	chr2:206641630	2	206641630	NRP2	Open sea	0.010795	0.002589	0.0000306	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10533624	chr12:3143428	12	3143428	TEAD4	Open sea	0.007814	0.001874	0.0000306	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18260919	chr3:135869103	3	135869103	MSL2	Open sea	-0.031359	0.007523	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05501682	chr6:2988723	6	2988723	DKFZP686I15217	North shore	0.007346	0.001762	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01047414	chr10:13341660	10	13341660	PHYH	Island	0.004795	0.00115	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00676085	chr12:52991945	12	52991945	KRT72	North shelf	0.016448	0.003946	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07587209	chr14:21944942	14	21944942	RAB2B;TOX4	Island	0.007767	0.001863	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19187564	chr19:42133492	19	42133492	CEACAM4	Open sea	0.007718	0.001852	0.0000307	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17245754	chr1:163389844	1	163389844	-	North shelf	-0.014524	0.003485	0.0000308	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24686918	chr1:221613658	1	221613658	-	Open sea	0.013779	0.003307	0.0000309	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06178179	chr16:66881892	16	66881892	CA7	South shelf	0.013413	0.003219	0.0000309	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13240639	chr22:30162856	22	30162856	UCRC;ZMAT5	Island	0.005724	0.001374	0.0000309	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00806929	chr16:62700011	16	62700011	-	Open sea	-0.017842	0.004283	0.0000311	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01107685	chr6:52403284	6	52403284	TRAM2	Open sea	-0.007298	0.001752	0.0000312	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13112154	chr10:102996565	10	102996565	FLJ41350	Island	0.006791	0.001631	0.0000313	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24114458	chr7:92380449	7	92380449	CDK6	Open sea	-0.025569	0.006142	0.0000314	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25355213	chr17:73780246	17	73780246	UNK	North shore	0.017801	0.004276	0.0000314	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26342114	chr5:172244462	5	172244462	-	Open sea	-0.020593	0.004947	0.0000315	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06531034	chr2:38766282	2	38766282	-	South shelf	0.012539	0.003013	0.0000316	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14732828	chr3:197476486	3	197476486	FYTTD1;KIAA0226	Island	0.005481	0.001317	0.0000316	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23200218	chr19:39050485	19	39050485	RYR1	North shore	0.014059	0.003378	0.0000316	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02387701	chr11:67810303	11	67810303	TCIRG1	South shelf	-0.010063	0.002418	0.0000317	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25487903	chr19:10828950	19	10828950	DNM2;MIR638	Island	0.006419	0.001543	0.0000317	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22940268	chr1:78244205	1	78244205	FAM73A	Open sea	-0.020475	0.004922	0.0000318	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23653444	chr17:19284627	17	19284627	MAPK7	South shelf	-0.008366	0.002011	0.0000318	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24828322	chr10:96830111	10	96830111	CYP2C8	Open sea	-0.022214	0.005341	0.0000319	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07011168	chr10:49797259	10	49797259	ARHGAP22	Open sea	0.015288	0.003676	0.000032	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00715988	chr14:96968640	14	96968640	PAPOLA	Island	0.006895	0.001658	0.000032	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11588903	chr19:17208493	19	17208493	MYO9B	North shelf	0.017966	0.00432	0.000032	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00660272	chr1:24231353	1	24231353	CNR2	South shore	0.008282	0.001992	0.0000323	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15452389	chr6:168200267	6	168200267	-	South shelf	-0.009016	0.002169	0.0000323	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16780562	chr14:102033251	14	102033251	-	South shore	0.011623	0.002796	0.0000323	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20931134	chr14:69045498	14	69045498	RAD51L1	Open sea	0.011077	0.002665	0.0000323	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17159537	chr19:7554074	19	7554074	PEX11G	South shore	0.003775	0.000908	0.0000323	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16481008	chr5:112043117	5	112043117	APC	Island	0.00448	0.001078	0.0000324	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21216933	chr8:6473595	8	6473595	MCPH1	Open sea	-0.006118	0.001472	0.0000324	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13383153	chr19:36980459	19	36980459	ZNF566	Island	0.005102	0.001228	0.0000324	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17643729	chr3:106966359	3	106966359	LOC344595	Open sea	-0.022581	0.005434	0.0000325	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25252495	chr10:6531856	10	6531856	PRKCQ	Open sea	-0.00718	0.001728	0.0000325	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10538235	chr7:92437732	7	92437732	CDK6	Open sea	-0.017622	0.004242	0.0000326	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11887996	chr12:120559003	12	120559003	-	South shelf	0.010025	0.002413	0.0000326	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16795184	chr16:56777257	16	56777257	NUP93	Open sea	0.014277	0.003436	0.0000326	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22277567	chr2:240226201	2	240226201	HDAC4	Open sea	0.017225	0.004147	0.0000327	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10735361	chr4:7044595	4	7044595	CCDC96;TADA2B	Island	0.00577	0.001389	0.0000327	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26796083	chr7:13985664	7	13985664	ETV1	Open sea	-0.019285	0.004644	0.0000328	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17130518	chr7:76825482	7	76825482	CCDC146;FGL2	Open sea	-0.022845	0.005502	0.0000329	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16809457	chr6:90399677	6	90399677	MDN1	Open sea	0.017469	0.004209	0.0000332	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14002185	chr17:39093939	17	39093939	KRT23	Open sea	-0.007981	0.001923	0.0000332	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09827353	chr2:221584360	2	221584360	-	Open sea	-0.023277	0.005609	0.0000333	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17824939	chr12:88421705	12	88421705	C12orf50	Open sea	-0.023223	0.005597	0.0000334	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17248540	chr16:69143500	16	69143500	HAS3	Island	-0.011022	0.002657	0.0000334	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25283841	chr1:1600982	1	1600982	LOC728661;CDK11B	Island	-0.00834	0.00201	0.0000335	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17071855	chr17:3819880	17	3819880	P2RX1	Open sea	0.004606	0.00111	0.0000335	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10274208	chr13:41351044	13	41351044	-	Open sea	0.009872	0.00238	0.0000336	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22928329	chr19:33183273	19	33183273	NUDT19	Island	0.004975	0.001199	0.0000336	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24073755	chr1:231955433	1	231955433	DISC2;DISC1;TSNAX-DISC1	Open sea	-0.025293	0.006099	0.0000337	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26771998	chr10:75490334	10	75490334	BMS1P4	Island	0.012211	0.002945	0.0000337	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08003810	chr16:3535037	16	3535037	NAT15	Island	-0.008851	0.002135	0.0000338	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00465137	chr2:944510	2	944510	-	North shore	-0.019741	0.004763	0.000034	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07249860	chr13:36421844	13	36421844	MIR548F5;DCLK1	Open sea	-0.022338	0.005389	0.000034	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09884077	chr15:23086698	15	23086698	NIPA1	Island	0.006852	0.001653	0.000034	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13853198	chr1:161185092	1	161185092	FCER1G	Open sea	-0.012223	0.002949	0.0000341	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00946381	chr16:2205241	16	2205241	TRAF7;SNORD60	Island	0.005704	0.001377	0.0000343	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12124767	chr7:117299297	7	117299297	CFTR	Open sea	0.012972	0.003132	0.0000344	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01955153	chr16:50769852	16	50769852	-	Open sea	0.009941	0.0024	0.0000344	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19167673	chr22:39640835	22	39640835	PDGFB	Island	0.006129	0.00148	0.0000345	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09977847	chr2:217070953	2	217070953	XRCC5	Open sea	0.01758	0.004246	0.0000346	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16270819	chr7:129588864	7	129588864	UBE2H	North shelf	0.008494	0.002051	0.0000346	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24908403	chr10:92493105	10	92493105	-	Open sea	-0.012084	0.002918	0.0000346	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14494854	chr15:25444498	15	25444498	SNORD115-16	Open sea	-0.009009	0.002176	0.0000346	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16707262	chr6:30164282	6	30164282	TRIM26	Open sea	-0.010183	0.00246	0.0000347	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10763953	chr7:114741115	7	114741115	-	Open sea	-0.017034	0.004114	0.0000347	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03060457	chr11:126138639	11	126138639	FOXRED1;SRPR	Island	0.003969	0.000959	0.0000347	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21935292	chr12:65152931	12	65152931	GNS	Island	0.005556	0.001342	0.0000347	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10530164	chr2:219858911	2	219858911	CRYBA2	Island	0.007846	0.001895	0.0000348	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14575983	chr5:99922152	5	99922152	FAM174A	Open sea	-0.017643	0.004263	0.0000349	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10066189	chr6:33239327	6	33239327	VPS52;RPS18	Island	0.004396	0.001062	0.0000349	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09734033	chr7:30630200	7	30630200	-	North shelf	-0.015449	0.003734	0.0000351	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27170158	chr16:1382005	16	1382005	-	North shore	0.005217	0.001261	0.0000351	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19612574	chr10:49608952	10	49608952	MAPK8	Open sea	-0.008157	0.001972	0.0000352	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23290159	chr5:150474234	5	150474234	-	Open sea	0.012863	0.00311	0.0000353	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27335855	chr5:60787422	5	60787422	ZSWIM6	Open sea	-0.021227	0.005134	0.0000355	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16077493	chr6:135172385	6	135172385	-	Open sea	-0.024753	0.005986	0.0000355	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07165637	chr16:28102779	16	28102779	-	Open sea	-0.008378	0.002026	0.0000355	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24768187	chr6:31646077	6	31646077	LY6G5C	North shelf	0.01155	0.002794	0.0000356	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12869623	chr17:9548898	17	9548898	USP43	Island	0.005697	0.001378	0.0000356	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04343242	chr4:104000066	4	104000066	BDH2	South shelf	-0.01247	0.003017	0.0000357	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20289746	chr10:106075738	10	106075738	ITPRIP	Island	-0.009388	0.002271	0.0000357	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05274953	chr21:44589163	21	44589163	CRYAA	North shore	-0.008305	0.002009	0.0000357	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02709261	chr1:179051893	1	179051893	TOR3A	Island	0.005276	0.001277	0.0000358	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02888917	chr6:32940425	6	32940425	BRD2	Island	0.00722	0.001747	0.0000358	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07504780	chr6:32821684	6	32821684	PSMB9;TAP1	Island	0.004402	0.001065	0.0000359	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14571714	chr19:19638267	19	19638267	YJEFN3;NDUFA13	North shore	-0.008189	0.001982	0.0000359	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14084456	chr1:204486034	1	204486034	MDM4	South shore	0.006373	0.001542	0.000036	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27126575	chr8:49043664	8	49043664	-	Island	0.021367	0.005171	0.000036	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20424709	chr10:37940673	10	37940673	-	Island	0.023975	0.005803	0.000036	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05421673	chr17:54671575	17	54671575	NOG	Island	0.006251	0.001513	0.000036	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15032960	chr20:56888536	20	56888536	RAB22A	South shelf	0.014985	0.003627	0.000036	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24041239	chr11:2922635	11	2922635	SLC22A18AS;SLC22A18	North shore	-0.008628	0.002089	0.0000361	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11869499	chr15:89872984	15	89872984	POLG	North shelf	0.021185	0.005128	0.0000361	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24897255	chr6:75915787	6	75915787	COL12A1	Island	0.007289	0.001765	0.0000363	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16659470	chr8:94744382	8	94744382	RBM12B	Open sea	-0.012651	0.003063	0.0000363	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22225298	chr1:179339155	1	179339155	C1orf125	South shelf	0.016884	0.004089	0.0000364	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24053721	chr4:142053970	4	142053970	RNF150	Island	0.006926	0.001677	0.0000364	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19747990	chr5:83588224	5	83588224	EDIL3	Open sea	-0.017714	0.00429	0.0000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06132876	chr6:31692080	6	31692080	C6orf25	South shore	-0.013682	0.003314	0.0000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07008343	chr17:38956362	17	38956362	KRT28	South shelf	-0.023935	0.005797	0.0000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24110839	chr17:36896577	17	36896577	PCGF2	Open sea	-0.009476	0.002295	0.0000365	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00658007	chr1:211666129	1	211666129	RD3	Open sea	0.009291	0.002251	0.0000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03923676	chr3:31614334	3	31614334	STT3B	Open sea	-0.021169	0.005128	0.0000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02252672	chr9:140195502	9	140195502	NRARP	Island	0.005496	0.001331	0.0000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09915978	chr12:6858533	12	6858533	MLF2	South shore	-0.01091	0.002643	0.0000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24091162	chr17:62010456	17	62010456	CD79B	Open sea	-0.011314	0.002741	0.0000366	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19195327	chr1:6479725	1	6479725	HES2	Island	0.008228	0.001994	0.0000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07753384	chr2:232646083	2	232646083	PDE6D	Island	0.005668	0.001373	0.0000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20655350	chr2:219124263	2	219124263	GPBAR1	Open sea	-0.008507	0.002061	0.0000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08461692	chr17:8481454	17	8481454	MYH10	Open sea	0.014512	0.003516	0.0000367	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24207698	chr2:166811308	2	166811308	TTC21B	South shore	-0.018287	0.004432	0.0000369	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17540496	chr3:53845930	3	53845930	CACNA1D	Open sea	-0.010783	0.002613	0.0000369	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04303274	chr6:111303269	6	111303269	RPF2	Island	0.004756	0.001153	0.000037	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19620840	chr19:49964960	19	49964960	ALDH16A1	North shore	-0.011544	0.002798	0.000037	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04077199	chr22:24989175	22	24989175	GGT1;C22orf36	Island	0.005523	0.001339	0.000037	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23786205	chr10:77057425	10	77057425	-	South shelf	0.013112	0.003179	0.0000372	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03762591	chr6:32040379	6	32040379	TNXB	Open sea	-0.016672	0.004043	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07970325	chr6:106497542	6	106497542	-	Open sea	0.011666	0.002829	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13381203	chr11:46961407	11	46961407	C11orf49	South shelf	-0.020339	0.004932	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08256761	chr12:80168523	12	80168523	PPP1R12A	Open sea	-0.020822	0.005049	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13048962	chr15:66790410	15	66790410	SNAPC5	South shore	0.015505	0.00376	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26433445	chr16:81764289	16	81764289	-	Open sea	0.007765	0.001883	0.0000373	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22457668	chr8:1318052	8	1318052	-	North shelf	-0.01186	0.00288	0.0000374	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22745440	chr6:33264022	6	33264022	RGL2	North shelf	-0.009605	0.00233	0.0000375	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13234415	chr12:65175168	12	65175168	-	Island	0.009209	0.002234	0.0000375	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07473599	chr14:93674967	14	93674967	UBR7	South shore	-0.025869	0.006275	0.0000375	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00390654	chr1:2214240	1	2214240	SKI	South shore	-0.008029	0.001948	0.0000376	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12540815	chr19:45394385	19	45394385	TOMM40	Island	0.00453	0.001099	0.0000376	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02194300	chr16:88506688	16	88506688	ZNF469	South shelf	-0.005753	0.001396	0.0000377	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	ch.5.95626522F	chr5:95600766	5	95600766	-	Open sea	0.006154	0.001493	0.0000378	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22974234	chr8:1238522	8	1238522	-	Open sea	-0.008776	0.00213	0.0000378	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16416152	chr16:67193901	16	67193901	FBXL8;TRADD	Island	0.006729	0.001633	0.0000378	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06972908	chr16:30488321	16	30488321	ITGAL	South shelf	0.012874	0.003125	0.0000379	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08262496	chr16:22023163	16	22023163	C16orf52	South shelf	-0.008834	0.002144	0.0000379	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23172853	chr1:231842206	1	231842206	TSNAX-DISC1;DISC1	Open sea	0.016415	0.003985	0.000038	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11574975	chr1:112058304	1	112058304	ADORA3	Island	-0.018363	0.004458	0.0000381	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26948536	chr2:175584419	2	175584419	-	North shore	-0.013135	0.00319	0.0000382	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25891433	chr4:26733372	4	26733372	TBC1D19	Open sea	0.015231	0.003699	0.0000382	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27145042	chr16:25026956	16	25026956	ARHGAP17	South shore	0.006015	0.001461	0.0000382	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17425351	chr11:110843045	11	110843045	-	Open sea	0.010171	0.00247	0.0000383	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02129266	chr16:618202	16	618202	NHLRC4	North shore	-0.010613	0.002577	0.0000383	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02586507	chr7:157934204	7	157934204	PTPRN2	North shelf	-0.008651	0.002101	0.0000384	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12801067	chr12:89380779	12	89380779	-	Open sea	0.011499	0.002793	0.0000384	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07855465	chr17:79377665	17	79377665	BAHCC1	Island	-0.008789	0.002135	0.0000384	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06099303	chr1:96672496	1	96672496	-	Open sea	0.014939	0.003629	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06967436	chr1:229012580	1	229012580	-	Open sea	-0.006657	0.001617	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05335107	chr2:109400084	2	109400084	RANBP2	North shelf	-0.013508	0.003282	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18659028	chr4:979389	4	979389	SLC26A1;IDUA	North shore	-0.013289	0.003228	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22505205	chr6:7726983	6	7726983	BMP6	Island	-0.014015	0.003405	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11271526	chr17:78155327	17	78155327	CARD14	Island	-0.007497	0.001821	0.0000385	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08964756	chr8:132924803	8	132924803	EFR3A	Open sea	-0.023564	0.005726	0.0000387	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18828927	chr6:29275263	6	29275263	OR14J1	Open sea	0.016227	0.003944	0.0000388	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23426156	chr8:126557901	8	126557901	-	Open sea	0.01566	0.003806	0.0000388	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04257163	chr12:89620072	12	89620072	-	Open sea	0.012421	0.00302	0.000039	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09063787	chr12:2921766	12	2921766	ITFG2	North shore	0.009357	0.002275	0.000039	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26860257	chr19:42755793	19	42755793	ERF	North shore	-0.015414	0.003747	0.000039	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05572370	chr11:2323247	11	2323247	TSPAN32;C11orf21	Open sea	0.007505	0.001825	0.0000391	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22878054	chr11:99397252	11	99397252	CNTN5	Open sea	0.014541	0.003537	0.0000393	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05905844	chr7:136280002	7	136280002	-	Open sea	0.01575	0.003831	0.0000394	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11170796	chr19:1650224	19	1650224	TCF3	South shelf	-0.009121	0.002219	0.0000394	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07170253	chr12:48119903	12	48119903	P11	Open sea	0.017943	0.004366	0.0000396	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06883868	chr18:13643516	18	13643516	C18orf1	South shore	0.011014	0.00268	0.0000396	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01835319	chr2:236900893	2	236900893	AGAP1	Open sea	-0.005185	0.001262	0.0000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15405121	chr5:14025461	5	14025461	-	Open sea	-0.025905	0.006304	0.0000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24304264	chr6:33424075	6	33424075	ZBTB9	South shore	-0.007321	0.001782	0.0000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26795312	chr8:146231199	8	146231199	C8orf77	South shelf	0.014148	0.003443	0.0000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19044550	chr11:70308049	11	70308049	-	North shore	0.011083	0.002697	0.0000397	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg27532938	chr4:1512248	4	1512248	-	North shore	-0.012427	0.003025	0.0000398	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01282432	chr14:57046857	14	57046857	C14orf101	South shore	0.006027	0.001467	0.0000399	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00784718	chr1:221916686	1	221916686	DUSP10	Island	0.006416	0.001562	0.00004	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01199721	chr12:120632764	12	120632764	GCN1L1	Island	0.005375	0.001309	0.00004	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09859491	chr1:1851542	1	1851542	TMEM52	South shore	-0.008492	0.002068	0.0000401	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05529201	chr16:87368205	16	87368205	FBXO31	South shore	-0.009632	0.002345	0.0000401	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01439754	chr2:112293267	2	112293267	-	Open sea	0.01224	0.002981	0.0000402	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06122613	chr1:151297900	1	151297900	PI4KB	North shelf	0.019327	0.004707	0.0000403	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01556246	chr8:8204802	8	8204802	PRAGMIN	Open sea	0.013689	0.003334	0.0000403	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24561952	chr11:5567996	11	5567996	OR52H1	Open sea	-0.012617	0.003073	0.0000403	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01893068	chr7:90254267	7	90254267	-	Open sea	0.01764	0.004297	0.0000404	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02375201	chr1:27114675	1	27114675	PIGV	Island	0.007183	0.00175	0.0000405	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17594003	chr2:145278808	2	145278808	ZEB2	North shelf	-0.022127	0.005391	0.0000405	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22558060	chr3:115551406	3	115551406	LSAMP	Open sea	-0.017763	0.004328	0.0000405	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01055121	chr11:13388349	11	13388349	ARNTL	Open sea	-0.007699	0.001876	0.0000406	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01224524	chr11:17757129	11	17757129	KCNC1	Island	0.007799	0.0019	0.0000406	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13145440	chr17:47841827	17	47841827	FAM117A	South shore	0.003739	0.000911	0.0000406	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12990803	chr22:29784624	22	29784624	AP1B1	Island	0.005254	0.00128	0.0000406	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13985446	chr9:99452347	9	99452347	-	South shelf	0.015225	0.00371	0.0000407	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18103031	chr10:135193522	10	135193522	PAOX	South shore	-0.007124	0.001736	0.0000407	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26614229	chr1:231156204	1	231156204	MIR1182;FAM89A	Open sea	0.012204	0.002975	0.0000409	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17237603	chr7:148876528	7	148876528	ZNF398	Open sea	-0.008408	0.002049	0.0000409	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10354474	chr3:50350760	3	50350760	HYAL1	Open sea	-0.009914	0.002417	0.000041	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg15346898	chr5:2094996	5	2094996	-	Open sea	-0.009435	0.0023	0.000041	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13341941	chr4:69187090	4	69187090	YTHDC1	Open sea	-0.020423	0.00498	0.0000412	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00613914	chr10:73569753	10	73569753	CDH23	South shelf	-0.005312	0.001295	0.0000412	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08297686	chr14:68943486	14	68943486	RAD51L1	Open sea	0.014281	0.003483	0.0000412	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06372223	chr16:87899784	16	87899784	SLC7A5	North shelf	0.011976	0.002921	0.0000412	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13085340	chr19:7682925	19	7682925	KIAA1543	Island	-0.008311	0.002027	0.0000412	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06281205	chr2:58462331	2	58462331	FANCL	Open sea	-0.006793	0.001657	0.0000413	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25916135	chr2:59071761	2	59071761	-	Open sea	0.013599	0.003317	0.0000414	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13022129	chr9:131683862	9	131683862	PHYHD1	Open sea	-0.007592	0.001852	0.0000414	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23777479	chr13:101169917	13	101169917	PCCA	Open sea	0.019892	0.004852	0.0000414	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02283151	chr14:100110845	14	100110845	HHIPL1	North shore	-0.008827	0.002153	0.0000414	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13655586	chr7:111202389	7	111202389	IMMP2L	Island	-0.008677	0.002117	0.0000416	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07211259	chr9:5510497	9	5510497	PDCD1LG2	Open sea	0.014899	0.003635	0.0000416	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12580783	chr12:49362475	12	49362475	WNT10B	North shore	0.012771	0.003116	0.0000416	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19021985	chr8:22398190	8	22398190	PPP3CC	Open sea	0.01308	0.003192	0.0000417	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03572664	chr14:61544141	14	61544141	-	Open sea	-0.019458	0.004748	0.0000417	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11860203	chr17:32582516	17	32582516	CCL2	Open sea	0.009768	0.002384	0.0000417	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00967711	chr3:100281202	3	100281202	TMEM45A	Open sea	0.009713	0.002371	0.0000418	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22702351	chr6:163673239	6	163673239	PACRG	Open sea	0.027783	0.006781	0.0000418	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01454148	chr17:7129155	17	7129155	DVL2	Open sea	-0.008059	0.001967	0.0000418	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10884975	chr1:218458566	1	218458566	RRP15	Island	0.006419	0.001567	0.0000419	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01161725	chr18:32924152	18	32924152	ZNF24	Island	0.004536	0.001107	0.000042	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08579819	chr1:9687256	1	9687256	-	Island	0.003656	0.000893	0.0000421	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08633665	chr8:128972829	8	128972829	MIR1205;PVT1	Open sea	0.009851	0.002405	0.0000421	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01848660	chr2:68269960	2	68269960	C1D	Open sea	-0.02517	0.006146	0.0000422	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10833014	chr14:102605952	14	102605952	WDR20;HSP90AA1	Island	0.005376	0.001313	0.0000422	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13534580	chr2:238662655	2	238662655	LRRFIP1	Open sea	-0.012774	0.00312	0.0000423	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02986451	chr18:59159403	18	59159403	CDH20	Open sea	0.01161	0.002835	0.0000423	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00196475	chr5:179233122	5	179233122	SQSTM1;MGAT4B	Island	0.004682	0.001144	0.0000424	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12688788	chr11:22644864	11	22644864	FANCF	North shore	-0.020417	0.004987	0.0000424	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11796233	chr1:2060236	1	2060236	PRKCZ	North shelf	-0.009394	0.002295	0.0000425	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10692118	chr17:43299500	17	43299500	FMNL1	Island	0.006052	0.001478	0.0000425	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22117666	chr6:29914938	6	29914938	-	South shelf	0.01123	0.002744	0.0000426	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08108289	chr20:62462937	20	62462937	-	Island	-0.00743	0.001816	0.0000427	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06540458	chr1:226951747	1	226951747	-	Open sea	0.017323	0.004233	0.0000428	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26153096	chr1:43748142	1	43748142	C1orf210	Open sea	0.009352	0.002286	0.0000431	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00036369	chr3:63988378	3	63988378	ATXN7	Open sea	-0.017932	0.004384	0.0000431	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20986887	chr6:28887284	6	28887284	TRIM27	North shelf	0.013813	0.003377	0.0000431	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17751684	chr17:79232024	17	79232024	SLC38A10	North shelf	-0.009158	0.002239	0.0000431	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21130374	chr21:42734266	21	42734266	MX2	Open sea	0.008043	0.001966	0.0000431	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26356242	chr11:105923175	11	105923175	KBTBD3	Open sea	-0.021021	0.00514	0.0000432	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04550367	chr14:101453070	14	101453070	SNORD114-27;SNORD114-26	Open sea	-0.009065	0.002217	0.0000432	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02444987	chr2:151343046	2	151343046	RND3	Island	-0.008779	0.002147	0.0000433	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20354848	chr11:2398773	11	2398773	CD81	Island	0.004951	0.001211	0.0000433	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21650436	chr12:49162444	12	49162444	ADCY6	Open sea	0.015594	0.003814	0.0000433	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11993160	chr18:12404041	18	12404041	-	North shelf	0.015453	0.003779	0.0000433	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00723840	chr22:20760206	22	20760206	ZNF74	Island	-0.009755	0.002386	0.0000433	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10012475	chr6:32764945	6	32764945	-	Open sea	0.004145	0.001014	0.0000434	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01210727	chr10:56666396	10	56666396	-	Open sea	-0.016801	0.004109	0.0000434	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05705366	chr5:53813915	5	53813915	SNX18	Island	0.006035	0.001476	0.0000435	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23696618	chr18:61583699	18	61583699	SERPINB10	Open sea	0.013597	0.003326	0.0000436	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22750986	chr17:12895279	17	12895279	ELAC2	Open sea	-0.008212	0.002009	0.0000437	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09530108	chr2:36586710	2	36586710	CRIM1	South shore	0.009668	0.002366	0.0000438	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08741280	chr4:1736942	4	1736942	TACC3	Island	-0.007184	0.001758	0.0000438	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02954015	chr4:530378	4	530378	PIGG	Island	-0.010306	0.002522	0.0000439	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06634950	chr3:169487146	3	169487146	ARPM1	Island	0.007713	0.001888	0.0000441	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07627445	chr4:1029632	4	1029632	-	Island	-0.010995	0.002692	0.0000441	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13670091	chr6:143723025	6	143723025	-	Open sea	0.013361	0.003271	0.0000441	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19036644	chr17:6554902	17	6554902	MED31;C17orf100	Island	0.00527	0.00129	0.0000441	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12832565	chr1:145715672	1	145715672	CD160	South shore	0.016471	0.004033	0.0000442	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10160539	chr2:162875880	2	162875880	DPP4	Open sea	-0.017196	0.00421	0.0000442	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16843994	chr2:4704518	2	4704518	-	Open sea	-0.014245	0.003488	0.0000443	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07974125	chr4:57843509	4	57843509	C4orf14	Island	0.005529	0.001354	0.0000443	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10949632	chr13:94520094	13	94520094	GPC6	Open sea	0.010432	0.002555	0.0000444	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08539991	chr19:36203832	19	36203832	ZBTB32	North shelf	0.012458	0.003051	0.0000444	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03545404	chr5:149556350	5	149556350	CDX1	Open sea	0.016168	0.00396	0.0000445	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02269049	chr12:104680606	12	104680606	TXNRD1	North shore	0.004488	0.001099	0.0000445	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00167916	chr6:32795877	6	32795877	TAP2	Open sea	-0.014974	0.003668	0.0000446	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17296053	chr1:167884595	1	167884595	ADCY10	Open sea	-0.008534	0.002091	0.0000447	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23437459	chr10:124907457	10	124907457	HMX2	Island	0.00887	0.002173	0.0000447	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00748072	chr2:174862824	2	174862824	-	Open sea	0.011945	0.002927	0.0000448	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22920792	chr19:32896607	19	32896607	DPY19L3	Island	0.004784	0.001172	0.0000448	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12251803	chr2:238639781	2	238639781	LRRFIP1	Open sea	0.01596	0.003911	0.0000449	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23261237	chr2:183989548	2	183989548	NUP35	Open sea	0.00392	0.000961	0.0000449	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25070639	chr17:41170693	17	41170693	VAT1	North shelf	0.011376	0.002788	0.0000449	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05045335	chr1:8457417	1	8457417	RERE	Open sea	0.01532	0.003756	0.0000453	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14894144	chr18:21270554	18	21270554	LAMA3	South shore	0.016248	0.003984	0.0000453	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24597466	chr1:232652356	1	232652356	SIPA1L2	Open sea	-0.021772	0.005339	0.0000454	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05200313	chr14:92960827	14	92960827	SLC24A4	Open sea	0.013457	0.0033	0.0000454	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14163706	chr9:95089361	9	95089361	NOL8;CENPP	South shore	-0.012028	0.00295	0.0000456	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg22424405	chr1:94677002	1	94677002	ARHGAP29	Open sea	-0.02066	0.005068	0.0000457	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08957605	chr2:238274537	2	238274537	COL6A3	Open sea	-0.008211	0.002014	0.0000457	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10207355	chr14:105409805	14	105409805	AHNAK2	Open sea	-0.007391	0.001813	0.0000457	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14597598	chr8:32503262	8	32503262	NRG1	Open sea	0.019065	0.004677	0.0000458	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13793507	chr4:122857949	4	122857949	TRPC3	South shelf	-0.009271	0.002275	0.0000459	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg24362401	chr18:39535226	18	39535226	PIK3C3	Open sea	0.008703	0.002135	0.0000459	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg08289189	chr22:19937277	22	19937277	COMT	Open sea	-0.020551	0.005043	0.0000459	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17858486	chr1:33782702	1	33782702	-	Open sea	-0.018312	0.004494	0.000046	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20569955	chr15:41245418	15	41245418	CHAC1	Island	0.00379	0.00093	0.000046	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05109049	chr17:29641333	17	29641333	NF1;EVI2B	Open sea	0.009433	0.002315	0.000046	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20891481	chr3:71115714	3	71115714	FOXP1	South shore	0.013709	0.003365	0.0000461	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12083893	chr10:91111929	10	91111929	-	Open sea	0.010849	0.002663	0.0000461	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26332061	chr20:2674697	20	2674697	EBF4	Island	0.012062	0.00296	0.0000461	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09067029	chr1:186954259	1	186954259	PLA2G4A	Open sea	0.009672	0.002374	0.0000463	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg12335829	chr2:157192128	2	157192128	-	South shore	0.011479	0.002818	0.0000463	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20662616	chr2:30454643	2	30454643	LBH	Island	0.004481	0.0011	0.0000464	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11254196	chr7:48109763	7	48109763	-	Open sea	-0.012526	0.003075	0.0000464	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07426077	chr1:1488581	1	1488581	SSU72	North shore	-0.006313	0.00155	0.0000465	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13829041	chr7:106585799	7	106585799	-	Open sea	-0.022551	0.005537	0.0000465	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21934230	chr1:228202608	1	228202608	WNT3A	Open sea	-0.016441	0.004038	0.0000467	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10369125	chr4:53706166	4	53706166	-	Open sea	0.012311	0.003024	0.0000467	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg04455567	chr6:3425259	6	3425259	SLC22A23	Open sea	-0.01714	0.00421	0.0000467	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21919809	chr19:36132842	19	36132842	ETV2	North shore	0.015389	0.00378	0.0000467	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14365100	chr1:113932889	1	113932889	MAGI3	Island	0.006637	0.00163	0.0000468	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23978473	chr6:3387815	6	3387815	SLC22A23	Open sea	-0.015824	0.003887	0.0000468	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14063347	chr9:88207974	9	88207974	AGTPBP1	Open sea	-0.021135	0.005192	0.0000468	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06997937	chr2:131674494	2	131674494	ARHGEF4	South shore	-0.010213	0.002509	0.000047	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21334191	chr3:148856448	3	148856448	HPS3	Open sea	-0.017916	0.004402	0.000047	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05228295	chr11:117049893	11	117049893	SIDT2	Island	0.005595	0.001375	0.0000471	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg02452500	chr11:13161927	11	13161927	-	Open sea	0.014079	0.00346	0.0000472	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg18217136	chr20:36157651	20	36157651	BLCAP	South shore	0.010258	0.002521	0.0000473	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21249595	chr6:30848811	6	30848811	-	North shelf	-0.009342	0.002297	0.0000475	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21592954	chr11:126304039	11	126304039	KIRREL3	Open sea	0.012799	0.003147	0.0000475	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg16218204	chr7:150755571	7	150755571	CDK5;SLC4A2	North shore	0.006675	0.001641	0.0000476	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07128021	chr10:80824237	10	80824237	LOC283050	North shelf	0.011484	0.002824	0.0000477	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01975338	chr14:97326473	14	97326473	VRK1	Open sea	-0.013174	0.00324	0.0000477	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg19671694	chr20:60971696	20	60971696	CABLES2	Island	-0.009974	0.002453	0.0000478	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13289463	chr2:161273519	2	161273519	RBMS1	Open sea	-0.023694	0.005828	0.0000479	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20839554	chr11:1012937	11	1012937	MUC6	South shelf	-0.010439	0.002568	0.0000479	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01433677	chr16:30365840	16	30365840	CD2BP2	North shore	0.00835	0.002054	0.0000479	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10099047	chr7:129444398	7	129444398	-	Open sea	-0.0099	0.002436	0.0000481	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20195820	chr17:3391678	17	3391678	ASPA	Open sea	-0.02224	0.005471	0.0000481	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg06738786	chr20:19265058	20	19265058	LOC100130264;SLC24A3	Open sea	0.016654	0.004098	0.0000483	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01902758	chr11:8816428	11	8816428	ST5	Open sea	0.012932	0.003183	0.0000484	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg17249170	chr10:119305798	10	119305798	EMX2;EMX2OS	South shore	0.008351	0.002056	0.0000487	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg03038380	chr15:78591716	15	78591716	WDR61	Open sea	0.004445	0.001094	0.0000487	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00456888	chr22:31476049	22	31476049	SMTN	North shore	-0.007218	0.001777	0.0000487	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg07459264	chr1:16767326	1	16767326	NECAP2	Island	0.004299	0.001059	0.0000488	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg11050480	chr10:104627909	10	104627909	AS3MT	North shore	-0.023352	0.00575	0.0000488	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14892058	chr12:14956310	12	14956310	WBP11;C12orf60	Island	0.005103	0.001257	0.0000488	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg13256912	chr3:11211081	3	11211081	HRH1	Open sea	0.015044	0.003705	0.000049	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26871279	chr11:2423559	11	2423559	TSSC4	South shore	-0.005898	0.001452	0.000049	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg05550371	chr3:49841167	3	49841167	C3orf54	Island	0.004383	0.00108	0.0000491	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14719804	chr11:63581433	11	63581433	C11orf84	Island	0.004958	0.001221	0.0000492	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg00428492	chr3:112708982	3	112708982	GTPBP8	North shore	0.017539	0.004321	0.0000493	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21837358	chr14:100107154	14	100107154	-	North shelf	0.009563	0.002356	0.0000493	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09209257	chr14:78907020	14	78907020	NRXN3	Open sea	0.015931	0.003926	0.0000495	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09172812	chr4:141564884	4	141564884	TBC1D9	Open sea	-0.010323	0.002544	0.0000496	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg14798119	chr17:43096906	17	43096906	-	Island	0.005694	0.001403	0.0000496	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg23722792	chr17:62050468	17	62050468	SCN4A	Open sea	-0.009802	0.002416	0.0000496	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg21781546	chr2:219525807	2	219525807	BCS1L	South shore	-0.010645	0.002624	0.0000497	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg26088244	chr12:98897833	12	98897833	-	Island	0.00384	0.000946	0.0000497	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg25803583	chr17:1648622	17	1648622	SERPINF2	Open sea	-0.00725	0.001787	0.0000497	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg10726931	chr3:64195412	3	64195412	PRICKLE2	Open sea	0.012858	0.00317	0.0000498	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg20944303	chr2:85788999	2	85788999	GGCX	South shore	0.003811	0.00094	0.0000499	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg09165274	chr13:103249774	13	103249774	TPP2	Island	0.004819	0.001188	0.0000499	-	27572077_schizophrenia_phase_1
Hannon E	-	27572077	2016-08-30	Schizophrenia	EFO_0000692	Phase 1	Table S3	DNA methylation	Schizophrenia	Age, sex, smoking, cell counts and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	675	1	-	Missing	European	cg01083340	chr11:66176265	11	66176265	-	Island	0.00729	0.001797	0.00005	-	27572077_schizophrenia_phase_1