author	consortium	pmid	date	trait	efo	analysis	source	outcome	exposure	covariates	outcome_units	exposure_units	methylation_array	tissue	further_details	n	n_cohorts	age	sex	ethnicity	cpg	chrpos	chr	pos	gene	type	beta	se	p	details	study_id
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg19185146	chr2:134880302	2	134880302	-	South shore	0.02444524	0.00449215	0.0000005	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20284937	chr1:45002564	1	45002564	RNF220	Open sea	-0.02045294	0.00382542	0.000000743	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg17807479	chr17:11145042	17	11145042	SHISA6	Island	-0.04270865	0.00833124	0.00000183	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20849025	chr11:58981043	11	58981043	MPEG1	Open sea	-0.03154597	0.00627877	0.00000276	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03353654	chr10:80677715	10	80677715	-	Open sea	0.03092291	0.0063547	0.00000518	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg13007207	chr7:105279391	7	105279391	ATXN7L1	Open sea	0.02453333	0.00504346	0.00000522	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg06925984	chr17:77767242	17	77767242	-	Island	0.05711965	0.01174223	0.00000522	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg19427338	chr2:42566455	2	42566455	-	Open sea	-0.03766843	0.00777785	0.00000576	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg10065739	chr16:4258150	16	4258150	SRL	Open sea	0.05511225	0.011468	0.00000657	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg07162820	chr14:24837146	14	24837146	NFATC4	North shore	0.03322973	0.0069911	0.00000808	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg26003993	chr7:1866358	7	1866358	MAD1L1	Island	0.04477207	0.00944658	0.00000852	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg10969205	chr3:45730616	3	45730616	SACM1L	Island	-0.00610573	0.00130323	0.0000105	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg08544453	chr1:11361900	1	11361900	-	Open sea	0.02381128	0.00508612	0.0000107	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg05374982	chr1:31376412	1	31376412	SDC3	Open sea	0.03419237	0.00730961	0.0000108	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg17978995	chr6:32021154	6	32021154	TNXB	Open sea	0.04980931	0.0106553	0.000011	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg06154531	chr1:846507	1	846507	-	South shore	-0.04466737	0.00956929	0.0000113	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg13445334	chr10:134531485	10	134531485	INPP5A	South shelf	-0.02599839	0.00557115	0.0000113	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03125498	chr19:34112111	19	34112111	CHST8	North shore	-0.0671605	0.01439487	0.0000114	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03096830	chr6:31782678	6	31782678	HSPA1L;HSPA1A	North shore	0.04511091	0.00969948	0.000012	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg10579113	chr4:177462176	4	177462176	-	Open sea	-0.03402826	0.00743371	0.0000159	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg10168457	chr17:79882876	17	79882876	MAFG	North shore	0.0273712	0.00599357	0.0000166	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg11585605	chr1:52401955	1	52401955	RAB3B	Open sea	-0.0187517	0.00411797	0.0000175	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg27258486	chr12:130420637	12	130420637	-	Open sea	-0.02132466	0.00468755	0.0000178	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg11574620	chr4:80246899	4	80246899	NAA11	Open sea	0.05295422	0.01165098	0.000018	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg08629884	chr4:1719983	4	1719983	TMEM129	North shelf	0.02141701	0.00473675	0.0000197	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg14214856	chr10:36965362	10	36965362	-	Open sea	-0.05371948	0.01192703	0.0000211	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20706468	chr6:111352500	6	111352500	-	Open sea	-0.02091292	0.00464603	0.0000213	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg10446043	chr6:39271757	6	39271757	KCNK17	Island	0.06025595	0.01339176	0.0000215	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg00497956	chr7:155385241	7	155385241	-	Open sea	-0.03567215	0.00795225	0.0000226	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg06938601	chr10:132942686	10	132942686	TCERG1L	Open sea	-0.03724344	0.00833048	0.0000239	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg16214440	chr6:169276578	6	169276578	-	Open sea	0.04102836	0.00920187	0.000025	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg26501664	chr17:48247390	17	48247390	SGCA	Open sea	0.03032326	0.00680774	0.0000255	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg18079881	chr14:55017201	14	55017201	-	Open sea	0.0229798	0.00517574	0.0000269	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg13327134	chr12:53618407	12	53618407	RARG	South shelf	0.02186731	0.00494812	0.0000291	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg06462065	chr19:55885168	19	55885168	-	North shelf	0.03713485	0.00845107	0.0000319	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg14294658	chr11:17994507	11	17994507	SERGEF	Open sea	0.03077608	0.00702619	0.0000336	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg08690999	chr5:92923396	5	92923396	NR2F1	North shore	-0.06898661	0.01576108	0.000034	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg07210454	chr11:2482303	11	2482303	KCNQ1	Open sea	0.01865126	0.00426699	0.0000348	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg18404559	chr7:151322523	7	151322523	PRKAG2	Open sea	-0.01822942	0.00417162	0.000035	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg24399540	chr2:207307150	2	207307150	ADAM23	North shore	0.01380367	0.00316168	0.0000355	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg15028458	chr3:58860290	3	58860290	C3orf67	Open sea	-0.0360176	0.00826696	0.0000367	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg21304766	chr4:37654566	4	37654566	RELL1	Open sea	-0.02883737	0.00661827	0.0000367	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg04865113	chr1:48960137	1	48960137	-	Open sea	0.0436697	0.01004192	0.0000378	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg11405695	chr1:1384091	1	1384091	ATAD3C	Open sea	0.0439522	0.01013979	0.0000399	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg18805612	chr12:120151550	12	120151550	MIR1178;CIT	Open sea	0.02433806	0.00561696	0.0000401	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20823772	chr8:99962013	8	99962013	OSR2	South shore	0.02407871	0.00556154	0.0000406	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg16901082	chr8:26435609	8	26435609	DPYSL2	Island	0.02770637	0.00640445	0.0000412	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg27210390	chr17:52978583	17	52978583	TOM1L1	South shore	0.0522758	0.01209505	0.0000418	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg25362709	chr11:124413728	11	124413728	OR8B12	Open sea	-0.0287887	0.00666926	0.0000426	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03918288	chr8:145101324	8	145101324	SPATC1	North shore	0.03437016	0.00796686	0.000043	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg26907472	chr16:69006828	16	69006828	TMCO7	Open sea	0.04665238	0.01081521	0.0000431	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg13578229	chr9:99540409	9	99540409	ZNF510	Island	-0.00134589	0.00031212	0.0000433	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03546806	chr12:114297307	12	114297307	RBM19	Open sea	0.06150974	0.0142738	0.0000438	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg11871295	chr18:47815430	18	47815430	CXXC1	South shore	0.05158049	0.01198459	0.0000447	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg27284288	chr11:60739005	11	60739005	CD6	Open sea	-0.00437732	0.00101889	0.000046	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg18422058	chr14:78951762	14	78951762	NRXN3	Open sea	-0.06217292	0.0144995	0.0000474	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg01999566	chr6:30624449	6	30624449	DHX16	Open sea	0.02728334	0.00636775	0.000048	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg02498174	chr5:39518835	5	39518835	-	Open sea	-0.03674395	0.00866055	0.000056	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg22987389	chr8:22428557	8	22428557	SORBS3	Open sea	0.0344073	0.00810532	0.0000578	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg22125754	chr11:66135627	11	66135627	SLC29A2	North shelf	0.03150395	0.00745753	0.0000599	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg02551745	chr3:156809115	3	156809115	-	South shelf	0.04913025	0.01168783	0.0000647	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg17802005	chr1:235035687	1	235035687	-	Open sea	0.02459291	0.0058453	0.000065	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg12906019	chr1:228594265	1	228594265	TRIM11	Island	-0.01474458	0.00351267	0.0000661	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg25959792	chr5:179775488	5	179775488	GFPT2	North shelf	0.03428791	0.00817514	0.0000669	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg12176793	chr8:90624127	8	90624127	-	Open sea	0.0199516	0.00475944	0.0000674	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg16000300	chr6:48033856	6	48033856	C6orf138	North shelf	-0.04230791	0.01009647	0.0000678	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg00052550	chr2:238969457	2	238969457	SCLY	Island	-0.00233199	0.00055697	0.0000687	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg05781893	chr2:179312799	2	179312799	PRKRA;MIR548N	North shelf	-0.02040156	0.00488306	0.000071	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg15244874	chr7:140102460	7	140102460	RAB19	Open sea	0.04491385	0.01075119	0.0000711	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20816493	chr7:131377089	7	131377089	-	Open sea	0.00758658	0.00181902	0.0000757	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg00458454	chr10:134499528	10	134499528	INPP5A	Open sea	0.00629728	0.00151381	0.0000765	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg14866907	chr20:43160301	20	43160301	PKIG	North shore	-0.00648935	0.00156026	0.0000774	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg04499011	chr6:36972127	6	36972127	FGD2	Open sea	-0.03474738	0.00836694	0.0000778	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg18765405	chr5:134644263	5	134644263	-	Open sea	0.03272085	0.00788442	0.0000786	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg20478129	chr14:27067372	14	27067372	NOVA1	South shore	-0.00149848	0.00036104	0.0000799	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg17750428	chr7:73081712	7	73081712	VPS37D	North shore	0.01817719	0.00438916	0.0000811	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg03500993	chr16:1551038	16	1551038	TELO2	South shore	0.006101	0.00147665	0.0000847	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg19075787	chr2:105372087	2	105372087	-	Open sea	-0.08595756	0.02084632	0.0000865	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg05038216	chr2:29339091	2	29339091	CLIP4	South shore	-0.04225785	0.01027178	0.0000895	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg13044649	chr3:195849011	3	195849011	-	Open sea	0.03448933	0.00838706	0.0000917	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg01962062	chr18:21901590	18	21901590	MIR320C2;OSBPL1A	Open sea	-0.02499836	0.00608974	0.0000925	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg22495124	chr17:64873528	17	64873528	CACNG5	Open sea	-0.02180758	0.00531547	0.0000941	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg09365002	chr6:33288329	6	33288329	DAXX	North shore	0.02045673	0.00499144	0.0000947	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg02382044	chr15:52121164	15	52121164	TMOD3	North shore	0.04107825	0.01003374	0.0000962	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg11070489	chr10:2125396	10	2125396	-	Open sea	0.01031638	0.00252128	0.000097	-	28603561_cleft_palate_vs_cleft_lip_palate
Sharp GC	-	28603561	2017-06-08	Cleft palate vs cleft lip palate	EFO_0003959, HP_0000175	-	Additional file 4	DNA methylation	Cleft palate vs cleft lip palate	Sex and technical covariates	Beta values	-	Illumina HumanMethylation450	Whole blood	-	98	1	0	Both	European,Other	cg26293512	chr16:58010433	16	58010433	TEPP	Open sea	0.04262495	0.01043167	0.000099	-	28603561_cleft_palate_vs_cleft_lip_palate